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SCNpilot_expt_1000_bf_scaffold_6535

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6535_1
unknown

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comp(125..418)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6535_2
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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623..2320
DNA (1698bp) protein (566aa)
Putative relaxase/mobilization nuclease family protein MobA n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J9B2_9BURK
IncP-type DNA relaxase TraI {ECO:0000313|EMBL:CDY78039.1}; Uncharacterized protein {ECO:0000313|EMBL:KDR39900.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6535_3
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2323..3648)
DNA (1326bp) protein (442aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Thauera sp. 27 RepID=N6YBS8_9RHOO
Signal peptide protein {ECO:0000313|EMBL:KIF82252.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
diguanylate cyclase/phosphodiesterase / diguanylate cyclase
SCNpilot_expt_1000_bf_scaffold_6535_4
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3648..4400)
DNA (753bp) protein (251aa)
Lytic transglycosylase, catalytic n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JVI2_BURVG
Uncharacterized protein {ECO:0000313|EMBL:KHD17790.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
lytic transglycosylase, catalytic; K03194 type IV secretion system protein VirB1
SCNpilot_expt_1000_bf_scaffold_6535_5
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4423..5502)
DNA (1080bp) protein (360aa)
conjugal transfer protein TraG n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B2FA98
TRAG family protein {ECO:0000313|EMBL:CCD29346.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
SCNpilot_expt_1000_bf_scaffold_6535_6
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5555..6802)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037F84CE
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:EKF73380.1}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
SCNpilot_expt_1000_bf_scaffold_6535_7
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6963..7655)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UIF3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KEZ04836.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6535_8
unknown

Not on your lists

comp(7713..7985)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6535_9
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7996..9186)
DNA (1191bp) protein (397aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V756_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43813.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
N-6 DNA methylase
Displaying 9 items

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