name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_347_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..808)
|
DNA topoisomerase I n=1 Tax=Thiobacillus denitrificans RepID=UPI00036324E2
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(805..1605)
|
DNA topoisomerase I n=1 Tax=Thiobacillus denitrificans RepID=UPI00036324E2
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1617..2063)
|
Protein smg homolog id=1307783 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Smg protein; K03747 Smg protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2068..3135)
|
DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F8EB0
rbh
SMF protein; K04096 DNA processing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3166..4455)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BC5F8
rbh
peptidoglycan-binding LysM-like protein
Peptidoglycan-binding LysM-like protein {ECO:0000313|EMBL:AAZ95966.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_347_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4602..5135
|
peptide deformylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382D3A1
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5146..6093
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A5411
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6198..7511
|
Fmu, rRNA SAM-dependent methyltransferase; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
16S rRNA methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003632888
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7465..8100
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376F0AE
rbh
proline rich signal peptide protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8100..10235
|
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
rbh
histidine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003738914
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10232..11506
|
nitrogen assimilation regulatory protein NtrX n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D4F3
rbh
two component Fis family transcriptional regulator
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11522..12895
|
potassium transporter peripheral membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003739FD6
rbh
trkA, sapG; potassium transporter peripheral membrane component; K03499 trk system potassium uptake protein TrkA
rbh
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:AAZ95973.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_347_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13049..14506
|
potassium transporter Trk n=1 Tax=Thiobacillus denitrificans RepID=UPI000381006D
rbh
trk system potassium uptake membrane protein; K03498 trk system potassium uptake protein TrkH
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_347_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14506..14829
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D1484
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14966..15241
|
Probable Fe(2+)-trafficking protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=FETP_THIDA
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15307..16008)
|
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037066E2
rbh
phosphate uptake regulator, PhoU; K02039 phosphate transport system protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16081..16485)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372447A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16482..17423)
|
hypothetical protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
thiamine monophosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000381CA5F
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17420..18244)
|
ATPase AAA n=1 Tax=Thiobacillus denitrificans RepID=UPI0003697500
rbh
ATPase; K06923
ATPase {ECO:0000313|EMBL:AAZ95981.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_347_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18380..18877
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368A8B4
rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18874..20184)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361E7FC
rbh
putative GAF sensor protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20181..20666)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F308B
rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20671..21897)
|
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
N-acetylglutamate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EFAF3
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21962..22201)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003632F27
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22336..22674)
|
type 1 pili tip component n=1 Tax=Thiobacillus denitrificans RepID=UPI00037ADFDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ95984.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_347_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22737..23393)
|
methylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A45C8
rbh
hypothetical protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23396..26632)
|
DNA helicase/exodeoxyribonuclease V subunit A (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CF2E7
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26625..29264)
|
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5]
rbh
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381B286
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_347_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29332..29655)
|
ferredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B00A9
7Fe ferredoxin; K05524 ferredoxin
7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain {ECO:0000313|EMBL:AAZ95988.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_347_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29816..30142
|
thioredoxin; K03671 thioredoxin 1
Thioredoxin id=1350671 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|