name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2109_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1164
|
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01010}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
23S rRNA methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000366F57E
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2109_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1203..2432
|
aspartate kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI000373C037
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2109_3
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3337..4392
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D90A9
rbh
pan1; multicopper oxidase type 1
Multicopper oxidase type 1 {ECO:0000313|EMBL:CAD84838.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2109_4
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4408..5100
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372F17E
rbh
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:CAD84837.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2109_5
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5097..5495
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003613C40
cytochrome c, class IC:cytochrome c, class I; K00406 cytochrome c oxidase cbb3-type subunit III
Cytochrome c, class IC:Cytochrome c, class I {ECO:0000313|EMBL:CAD84836.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2109_6
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5513..6448
|
copper-containing nitrite reductase (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
rbh
Putative copper-containing nitrite reductase {ECO:0000313|EMBL:CAL63352.1}; EC=1.7.2.1 {ECO:0000313|EMBL:CAL63352.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
nitrite reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D5783
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2109_7
unknown
|
Not on your lists |
6568..6861
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003743EC5
|
|
SCNpilot_expt_1000_bf_scaffold_2109_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6964..8280
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D89A1
rbh
heavy metal efflux system protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2109_9
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8283..11387
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379F2C6
rbh
cusA; RND family outer membrane copper/silver/drug transport protein
rbh
Tax=RBG_16_Betaproteobacteria_56_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2109_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11384..12745)
|
Fis family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C84EC
rbh
Fis family transcriptional regulator
rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:BAN34299.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2109_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12987..13955
|
peptide chain release factor 3 n=1 Tax=Thiobacillus denitrificans RepID=UPI000376929E
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|