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SCNpilot_expt_1000_bf_scaffold_2172

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2172_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158..679
DNA (522bp) protein (174aa)
hypothetical protein id=12493855 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Conserved secreted protein with internal repeats {ECO:0000313|EMBL:AAZ96563.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2172_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(818..1645)
DNA (828bp) protein (276aa)
hypothetical protein; K07178 RIO kinase 1 [EC:2.7.11.1] rbh
Putative uncharacterized protein id=1337896 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1657..2382)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003782D4E
hypothetical protein; K09136 ribosomal protein S12 methylthiotransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2172_4

Not on your lists

2525..3382
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YE79_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD35611.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_2172_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3466..4131
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367C2EC rbh
TPR repeat-containing protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2172_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4135..5094)
DNA (960bp) protein (320aa)
glycosyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003735232 rbh
glycosyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2172_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5138..5917
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003766E2A rbh
tRNA/rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5945..7957)
DNA (2013bp) protein (671aa)
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E162F rbh
diguanylate cyclase/phosphodiesterase rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8201..8977)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365094A rbh
hypothetical protein; K09773 hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2172_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8989..11331
DNA (2343bp) protein (781aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] rbh
phosphoenolpyruvate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F388A rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11355..11780
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P927_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SCNpilot_expt_1000_bf_scaffold_2172_12
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11977..13446)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii (strain ATCC BAA-894) RepID=A7MQY8_CROS8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ71975.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2172_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13487..14329
DNA (843bp) protein (281aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AA06C rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14373..15683
DNA (1311bp) protein (437aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11]
enolase n=1 Tax=Thiobacillus denitrificans RepID=UPI000363B6BC
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15689..15973
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B14FB
cell division protein FtsB; K05589 cell division protein FtsB
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2172_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15966..17183
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003639630 rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2172_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17183..19258
DNA (2076bp) protein (692aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] rbh
NAD-dependent DNA ligase LigA n=1 Tax=Thiobacillus denitrificans RepID=UPI0003629536 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2172_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19402..20136
DNA (735bp) protein (245aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036424E9
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20137..21549)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EF88F rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2172_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21740..22537
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FA27B rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2172_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22621..22827
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003764633
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2172_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23647..24021
DNA (375bp) protein (125aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
phosphoribosylformylglycinamidine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AA775
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 22 items

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