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SCNpilot_expt_1000_bf_scaffold_2243

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2243_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..907)
DNA (906bp) protein (302aa)
FAD-linked oxidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4750
(S)-2-hydroxy-acid oxidase
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:AAZ96172.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2243_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1043..1675
DNA (633bp) protein (211aa)
hypothetical protein; K08984 putative membrane protein id=12495822 bin=THIO_MID species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K08984 putative membrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2243_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1740..2822)
DNA (1083bp) protein (361aa)
quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72] rbh
quinolinate synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA922 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2950..3603
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D67E8 rbh
hypothetical protein; K10763 DnaA-homolog protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3604..3981)
DNA (378bp) protein (126aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BC054
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2243_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4151..4417)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9EB0
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2243_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4589..7675)
DNA (3087bp) protein (1029aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003643564 rbh
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..8768)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00038131ED rbh
HlyD family secretion protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_1000_bf_scaffold_2243_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8936..9874
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036899FE rbh
sulfite oxidase subunit YedY; K07147
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9874..10503
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366462A rbh
sulfite oxidase subunit YedZ
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11642..12886)
DNA (1245bp) protein (415aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
diaminopimelate decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI000363206B rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13007..13342
DNA (336bp) protein (112aa)
Protein CyaY id=1347829 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
CyaY protein; K06202 CyaY protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2243_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13356..13943
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381EE2D rbh
MarR family transcriptional regulator
Transcriptional Regulator, MarR family {ECO:0000313|EMBL:AAZ96181.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2243_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13940..14887)
DNA (948bp) protein (316aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000255|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000255|HAMAP-Rule:MF_00006}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
argininosuccinate lyase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037670D5
Displaying 14 items

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