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SCNpilot_expt_1000_bf_scaffold_2323

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2323_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..3295)
DNA (3294bp) protein (1098aa)
Glutamate synthase large subunit {ECO:0000313|EMBL:AAZ98720.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AAZ98720.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
gltB; glutamate synthase subunit alpha (EC:1.4.1.13); K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase large subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF94_THIDA
SCNpilot_expt_1000_bf_scaffold_2323_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3521..4369
DNA (849bp) protein (283aa)
Endonuclease/exonuclease/phosphatase id=1343561 bin=GWE1_T_denit_62_9 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Endonuclease/exonuclease/phosphatase; K06896 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2323_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4389..4970)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371866F
late embryogenesis abundant protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2323_4
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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5173..7824
DNA (2652bp) protein (884aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A649E rbh
Glucosidase {ECO:0000313|EMBL:KHD31951.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2323_5
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7832..8293)
DNA (462bp) protein (154aa)
Putative type I restriction enzymeP M protein {ECO:0000313|EMBL:KFB76681.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KFB76681.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
type I restriction endonuclease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035CE9AF
SCNpilot_expt_1000_bf_scaffold_2323_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8415..10340)
DNA (1926bp) protein (642aa)
transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Predicted transcriptional regulator n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFH6_THIDA
Predicted transcriptional regulator {ECO:0000313|EMBL:AAZ98634.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2323_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10567..10932)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C7EBD
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2323_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10929..11711)
DNA (783bp) protein (261aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
prolipoprotein diacylglyceryl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C8152 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_2323_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11800..12177
DNA (378bp) protein (126aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase id=1343564 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 9 items

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