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SCNpilot_expt_1000_bf_scaffold_2962

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2962_1
unknown

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comp(3..479)
DNA (477bp) protein (159aa)
id=12494856 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_expt_1000_bf_scaffold_2962_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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799..3366
DNA (2568bp) protein (856aa)
DNA mismatch repair protein MutS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037179EB rbh
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2962_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3363..3632
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364E644
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97111.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_2962_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3629..3853)
DNA (225bp) protein (75aa)
RNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003620C2E
hypothetical protein; K14761 ribosome-associated protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2962_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3854..4156)
DNA (303bp) protein (101aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DEA0E
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2962_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4213..5658)
DNA (1446bp) protein (482aa)
nuoN; NADH dehydrogenase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Thiobacillus denitrificans RepID=UPI000365515B rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_2962_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5668..7152)
DNA (1485bp) protein (495aa)
nuoM; NADH dehydrogenase subunit M (EC:1.6.5.3); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] rbh
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Thiobacillus denitrificans RepID=UPI000368D282 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_2962_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7179..8834)
DNA (1656bp) protein (552aa)
nuoL; NADH dehydrogenase I subunit L (EC:1.6.5.3); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH dehydrogenase I chain L id=1326631 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 8 items

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