name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1065_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..279)
|
narH; nitrate reductase 1, Fe-S (beta) subunit (EC:1.7.99.4); K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
nitrate reductase A subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI0003686CB1
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(398..1720)
|
narK3; MFS-type, NNP family nitrate/nitrite transporter; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase 1, alpha chain id=1329777 bin=GWE1_T_denit_62_9 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_3
uncultured bacterium, Bacteria
|
Not on your lists |
comp(1696..2580)
|
Putative dissimilatory membrane-bound nitrate reductase (Fragment) n=1 Tax=uncultured bacterium RepID=C9YSM6_9BACT
Putative dissimilatory membrane-bound nitrate reductase {ECO:0000313|EMBL:CBG27922.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2614..4068)
|
narG; nitrate reductase 1, subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
nitrate reductase A subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI0003787A5D
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4190..5800)
|
Nitrate/nitrite antiporter id=1329778 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
nitrate/nitrite antiporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5830..7086)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036406D5
rbh
major facilitator transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
Proton/nitrate symporter {ECO:0000313|EMBL:ABB30576.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7473..7895
|
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI000379FC37
putative cytochrome c-type protein
Putative cytochrome c-type protein {ECO:0000313|EMBL:AAZ97351.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7992..8594)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F405F
rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8594..8959)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D1759
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8956..9228)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003724C63
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9234..9755)
|
NosL n=1 Tax=Thiobacillus denitrificans RepID=UPI0003738E3B
rbh
putative nitrous oxide reduction lipoprotein
Putative lipoprotein involved in nitrous oxide reduction {ECO:0000313|EMBL:AAZ97347.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9752..10567)
|
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C2DED
rbh
ABC transporter transmembrane protein; K01992 ABC-2 type transport system permease protein
rbh
ABC transporter transmembrane protein {ECO:0000313|EMBL:AAZ97346.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10578..11534)
|
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360653D
rbh
ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein
rbh
ABC transporter ATPase {ECO:0000313|EMBL:AAZ97345.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11506..12789)
|
copper ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000371C25B
rbh
nitrous oxidase accessory protein; K07218 nitrous oxidase accessory protein
rbh
Nitrous oxidase accessory protein {ECO:0000313|EMBL:AAZ97344.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12777..15434)
|
FMN-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366CE6A
rbh
transmembrane regulatory NosR transcription regulator protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15583..17517)
|
Nitrous-oxide reductase {ECO:0000313|EMBL:AAZ97342.1}; EC=1.7.2.4 {ECO:0000313|EMBL:AAZ97342.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
nitrous-oxide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CF8D8
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1065_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17876..19762
|
periplasmic sensor signal transduction histidine kinase; K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365FDE7
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19769..20428
|
LuxR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000378A5AA
rbh
transcriptional regulator NarL; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL
rbh
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ97352.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20483..21487)
|
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE id=12495168 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21495..23717)
|
hydrogenase maturation protein HypF n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D68C2
rbh
hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF
rbh
Hydrogenase maturation protein HypF {ECO:0000313|EMBL:AAZ97338.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23710..24558)
|
hydrogenase assembly protein HupF n=1 Tax=Thiobacillus denitrificans RepID=UPI000363C318
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:AAZ97337.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24534..24779)
|
hydrogenase assembly protein HupF n=1 Tax=Thiobacillus denitrificans RepID=UPI000363C318
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:AAZ97337.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24779..25585)
|
hydrogenase nickel incorporation protein HypB n=1 Tax=Thiobacillus denitrificans RepID=UPI0003644EDF
rbh
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:AAZ97336.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1065_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25578..25964)
|
hydrogenase expression/formation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF id=12493980 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hydrogenase expression/formation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25957..26118)
|
hydrogenase assembly protein HypC n=1 Tax=Thiobacillus denitrificans RepID=UPI0003697EE7
hydrogenase expression/formation protein HupF/HypC; K04653 hydrogenase expression/formation protein HypC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26326..26778
|
peptidase M52, hydrogen uptake protein; K03605 hydrogenase 1 maturation protease [EC:3.4.24.-]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FF2DD
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26768..27184
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003650BE4
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27229..28206
|
Ni/Fe hydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003725572
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28283..28942
|
Putative uncharacterized protein id=1337330 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1065_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28939..30201
|
heterodisulfide reductase n=1 Tax=Thiobacillus thioparus RepID=UPI000363E139
heterodisulfide reductase
Heterodisulfide reductase {ECO:0000313|EMBL:AAZ97329.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|