name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1175_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..751)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368BCD2
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADJ22546.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(859..1161)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F0C92
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22547.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1173..1451)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B461B
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1655..1837)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375C7FF
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1980..2309)
|
aldehyde-activating protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BE4E0
formaldehyde-activating enzyme
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2309..2497)
|
aldehyde-activating protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BE4E0
formaldehyde-activating enzyme
Formaldehyde-activating enzyme {ECO:0000313|EMBL:ADJ23678.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2604..3800)
|
SCO1/SenC family protein/methylamine utilization protein MauG id=12498378 bin=THIO_MID species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCO1/SenC family protein/methylamine utilization protein MauG
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3797..4573)
|
SCO1/SenC family protein/methylamine utilization protein MauG id=12498377 bin=THIO_MID species=Methylobacter marinus genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCO1/SenC family protein/methylamine utilization protein MauG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4590..5978)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DFFC4
rbh
selenium-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_10
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6399..6839
|
NADH dehydrogenase I subunit E; K00127 formate dehydrogenase, gamma subunit id=12498375 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
NAD-dependent formate dehydrogenase gamma subunit {ECO:0000313|EMBL:EPX75615.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
NADH dehydrogenase (ubiquinone) 24 kda subunit; K00127 formate dehydrogenase, gamma subunit
|
|
SCNpilot_expt_1000_bf_scaffold_1175_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6836..8398
|
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit
NADH dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C2161
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_12
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8395..11256
|
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=12498373 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
yjgC; putative oxidoreductase YjgC (EC:1.-.-.-)
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ERI52606.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_13
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12081..12317
|
NAD-dependent formate dehydrogenase subunit delta; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360FB8C
NAD-dependent formate dehydrogenase subunit delta {ECO:0000313|EMBL:EGI77512.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_14
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12314..12877
|
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A442
rbh
Tax=CG_Beta_01
|
|
SCNpilot_expt_1000_bf_scaffold_1175_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13063..13812
|
group 2 family glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
rbh
dolichol-phosphate mannosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BE215
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13956..14675
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E44F3
rbh
hypothetical protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14656..16254
|
putative glycosyltransferase id=12493082 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
putative glycosyltransferase
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16258..16503)
|
RNA-binding protein Hfq n=1 Tax=Thiobacillus RepID=UPI00037A4DDE
RNA-binding protein Hfq; K03666 host factor-I protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16562..17377)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FAF06
rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17389..17652)
|
putative stress-induced morphogen BolA; K05527 BolA protein
Putative stress-induced morphogen BolA id=1348886 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Putative stress-induced morphogen BolA {ECO:0000313|EMBL:AAZ97484.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17649..17951)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381743E
hypothetical protein; K09780 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17951..18568)
|
septation protein A n=1 Tax=Thiobacillus denitrificans RepID=UPI000364B65D
rbh
intracellular septation protein A; K06190 intracellular septation protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18676..19539
|
phosphoesterase n=1 Tax=Thiobacillus denitrificans RepID=UPI000362A8A4
rbh
phosphoesterase PHP; K07053
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19552..20175
|
translation factor Sua5 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003601C92
rbh
putative translation factor Sua5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20182..20886
|
peptidase M50 n=1 Tax=Thiobacillus thioparus RepID=UPI0003625CFA
putative integral membrane transmembrane protein
Putative integral membrane transmembrane protein {ECO:0000313|EMBL:AAZ97479.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20933..22123
|
tryptophanyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI000376BAED
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22143..22571)
|
peptide chain release factor I n=1 Tax=Thiobacillus denitrificans RepID=UPI0003755B45
hypothetical protein; K15034 ribosome-associated protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97476.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1175_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22588..23430)
|
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
glutamate racemase n=1 Tax=Thiobacillus denitrificans RepID=UPI000380F024
|
|
SCNpilot_expt_1000_bf_scaffold_1175_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23436..24050
|
cobalt transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003743D2B
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1175_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24081..24539)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364E20C
4Fe-4S ferredoxin protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|