name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1221_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(137..1417)
|
adenylosuccinate synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B2587
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1432..2397)
|
ATP phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036518BB
rbh
ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2413..2601)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374ED1F
hypothetical protein; K09937 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2598..3479)
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378A6D4
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3476..4675)
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003600E2C
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4681..5865)
|
GTP-binding proten HflX n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EDE89
rbh
GTP-binding protein HflX; K03665 GTP-binding protein HflX
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6033..7841)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365C75F
rbh
hypothetical protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7860..8942)
|
galactose-1-phosphate uridyl transferase, class I (EC:2.7.7.10); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
galactose-1-phosphate uridylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003739CB2
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9143..9424
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A912C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96553.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9427..9678
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037490F6
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_11
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9644..11641)
|
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003712E6C
rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACR02542.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11752..13062)
|
engA, yfgK, yphC; GTP-binding protein EngA; K03977 GTP-binding protein id=12493866 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
engA, yfgK, yphC; GTP-binding protein EngA; K03977 GTP-binding protein
GTPase Der {ECO:0000255|HAMAP-Rule:MF_00195}; GTP-binding protein EngA {ECO:0000255|HAMAP-Rule:MF_00195}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13108..14262)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A9027
rbh
pyrrolo-quinoline quinone
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14265..14906)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379670A
rbh
hypothetical protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14920..16185)
|
histidyl-tRNA synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000362106A
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16208..17428)
|
ispG, gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003713503
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17461..18273)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E52B8
rbh
hypothetical protein; K15539 cytoskeleton protein RodZ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18270..19040)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7605
rbh
TPR repeat-containing pilus assembly protein PilF; K02656 type IV pilus assembly protein PilF
rbh
Putative pilus assembly protein PilF, TPR repeat {ECO:0000313|EMBL:AAZ96545.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19037..20140)
|
50S rRNA methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D5F95
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20153..20578)
|
nucleoside diphosphate kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BAF29
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20789..21547
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B1008
rbh
integral membrane protein TerC
rbh
Integral membrane protein TerC {ECO:0000313|EMBL:ABE45570.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21544..22839)
|
cell cycle protein MesJ; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037898AB
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22853..23821)
|
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha id=1357658 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23903..24385)
|
fkbp-type peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
peptidylprolyl isomerase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003819DCD
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24382..24861)
|
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
alkyl hydroperoxide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A1C65
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24935..26053
|
cupin n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CEDFF
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ96538.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26050..26520
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C3A5A
rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96537.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26526..27335)
|
anaerobic ribonucleoside triphosphate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003747F3C
rbh
hypothetical protein
rbh
Putative exported protein {ECO:0000313|EMBL:AAZ96536.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1221_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27317..28390)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD9FD
rbh
hypothetical protein; K11720 lipopolysaccharide export system permease protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1221_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28387..29466)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AD778
rbh
hypothetical protein; K07091 lipopolysaccharide export system permease protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ96534.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|