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SCNpilot_expt_1000_bf_scaffold_1282

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1282_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1282_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


86..394
DNA (309bp) protein (103aa)
rpsJ, nusE; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12495324 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsJ, nusE; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1282_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


522..1166
DNA (645bp) protein (215aa)
50S ribosomal protein L3 n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C51F0
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1166..1783
DNA (618bp) protein (206aa)
50S ribosomal protein L4 id=1308461 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1783..2088
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BFAA3
50S ribosomal protein L23P; K02892 large subunit ribosomal protein L23
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2100..2927
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EFB98 rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2943..3218
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003734CF2
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3229..3558
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Thiobacillus denitrificans RepID=UPI000372EF45
50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3568..4272
DNA (705bp) protein (235aa)
30S ribosomal protein S3 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DC109 rbh
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4256..4672
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037534F1
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1282_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4676..4870
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Thiobacillus thioparus RepID=UPI00037A7A7A
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4867..5130
DNA (264bp) protein (88aa)
30S ribosomal protein S17 id=1336994 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5301..5669
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C7561
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1282_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5679..6002
DNA (324bp) protein (108aa)
50S ribosomal protein L24 id=1336996 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L24P; K02895 large subunit ribosomal protein L24
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6005..6544
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003815736 rbh
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6552..6857
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Thiobacillus denitrificans RepID=UPI000363AC1B
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6870..7265
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Thiobacillus thioparus RepID=UPI00037C5C8A
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1282_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7278..7808
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003631E9D rbh
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7825..8178
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037139B4
50S ribosomal protein L18P; K02881 large subunit ribosomal protein L18
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1282_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8194..8709
DNA (516bp) protein (172aa)
30S ribosomal protein S5 n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F082B rbh
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8713..8898
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D00D3
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8899..9333
DNA (435bp) protein (145aa)
50S ribosomal protein L15 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FF3BF
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9353..10666
DNA (1314bp) protein (438aa)
preprotein translocase subunit SecY n=1 Tax=Thiobacillus denitrificans RepID=UPI0003809AF1 rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10666..10884
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=12495302 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..11042
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Thiomonas RepID=D5X638_THIK1
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1282_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11134..11490
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS13_THIDA
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1282_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11500..11892
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Thiobacillus denitrificans RepID=UPI0003749699
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11907..12536
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FF57C rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12580..13560
DNA (981bp) protein (327aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E7F40 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1282_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13659..14048
DNA (390bp) protein (130aa)
50S ribosomal protein L17 n=1 Tax=Thiobacillus denitrificans RepID=UPI000375CB3B
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 34 in total

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