name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1294_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..2477
|
Dihydroxy-acid dehydratase id=1343564 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2565..3170
|
cobyrinic acid a,c-diamide synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000368B339
rbh
partition-like protein; K03496 chromosome partitioning protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3192..3770)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361D04A
rbh
hypothetical protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3917..5950
|
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E59AB
rbh
hypothetical protein; K06888
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6034..6831
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378AD17
rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6966..7286
|
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645F72
cytochrome c transmembrane protein
Probable cytochrome C transmembrane protein {ECO:0000313|EMBL:AAZ98679.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7428..8945
|
alanine glycine permease n=1 Tax=Thiobacillus denitrificans RepID=UPI0003794EF0
rbh
sodium:alanine symporter; K03310 alanine or glycine:cation symporter, AGCS family
rbh
Sodium:alanine symporter {ECO:0000313|EMBL:AAZ98678.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8968..9558)
|
5-formyltetrahydrofolate cyclo-ligase family protein; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
rbh
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003643B46
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9762..10064)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EA28F
cell division protein ZapA; K09888 cell division protein ZapA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10064..10261)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E038D
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10629..12644
|
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein id=12495041 bin=THIO_HI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12716..13354
|
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP id=1354787 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_13
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13447..14265
|
mechanosensitive ion channel family protein; K03442 small conductance mechanosensitive channel id=12496189 bin=THIO_MID species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel
rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABK99231.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14262..15188
|
glutamyl-Q tRNA(Asp) ligase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003658CF4
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15232..15786
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A91D1
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ98661.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16021..17064
|
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=12498675 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17084..17341
|
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3C5B
tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17338..18294
|
phosphate starvation protein PhoH n=1 Tax=Thiobacillus denitrificans RepID=UPI0003704840
rbh
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18281..18733
|
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heat-shock protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003827700
hypothetical protein; K07042 probable rRNA maturation factor
|
|
SCNpilot_expt_1000_bf_scaffold_1294_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18746..19606
|
cation transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000364BB9D
rbh
hypothetical protein; K06189 magnesium and cobalt transporter
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_21
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19898..20422)
|
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=E2MHS0_PSEUB
Uncharacterized protein {ECO:0000313|EMBL:KGK93640.1}; TaxID=323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. tomato.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21314..22456)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DE689
rbh
hypothetical protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22531..23271
|
pteridine reductase; K03793 pteridine reductase [EC:1.5.1.33]
pteridine reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B391D
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23479..24096)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376F1D7
rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24378..25790)
|
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A4396
rbh
major facilitator superfamily drug efflux transporter
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26174..26629
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368A276
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97468.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_27
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26716..27105)
|
hypothetical protein id=12493404 bin=THIO_HI species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:AEJ01300.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1294_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27366..27893)
|
nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] id=12496202 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27893..28354)
|
nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Nucleoside-diphosphate-sugar epimerase id=1304150 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1294_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28410..29690
|
3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
rbh
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382BFEA
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|