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SCNpilot_expt_1000_bf_scaffold_1447

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1447_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000379D83D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1447_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299..1018)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D9E04
putative hemolysin
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1447_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1126..1590)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003624E2E
outer membrane lipoprotein; K06077 outer membrane lipoprotein SlyB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1447_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1660..2592)
DNA (933bp) protein (311aa)
carbohydrate kinase; K00856 adenosine kinase [EC:2.7.1.20]
sugar kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D633F rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1447_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2703..3596
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369EEFE rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1447_6
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3641..4408)
DNA (768bp) protein (256aa)
ompR1; Transcriptional regulatory protein ompR id=12498545 bin=THIO_MID species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative two-component response regulator
Tax=GWE2_Gallionellales_58_10_curated
SCNpilot_expt_1000_bf_scaffold_1447_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4452..5279)
DNA (828bp) protein (276aa)
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12498546 bin=THIO_MID species=Methyloglobulus morosus genus=Methyloglobulus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_1447_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5324..6979)
DNA (1656bp) protein (552aa)
membrane protein component of ABC phosphate transporter pstA-like; K02038 phosphate transport system permease protein id=12498547 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
membrane protein component of ABC phosphate transporter pstA-like; K02038 phosphate transport system permease protein
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_1447_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6992..9268)
DNA (2277bp) protein (759aa)
ABC transporter permease; K02037 phosphate transport system permease protein id=12498548 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ABC transporter permease; K02037 phosphate transport system permease protein rbh
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_1447_10
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9364..9999)
DNA (636bp) protein (212aa)
signal peptide id=12498549 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
signal peptide
Tax=RBG_16_Gallionellales_56_9_curated
SCNpilot_expt_1000_bf_scaffold_1447_11
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..11047)
DNA (984bp) protein (328aa)
ABC-type phosphate transport system periplasmic protein; K02040 phosphate transport system substrate-binding protein id=12498550 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ABC-type phosphate transport system periplasmic protein; K02040 phosphate transport system substrate-binding protein rbh
Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_expt_1000_bf_scaffold_1447_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11407..11952)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037269B8 rbh
phosphoesterase PA-phosphatase-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1447_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11966..13210)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003823F03 rbh
group 1 glycosyl transferase rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1447_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13269..14273)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366C520 rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1447_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14885..15262)
DNA (378bp) protein (126aa)
diacylglycerol kinase (EC:2.7.1.107); K00901 diacylglycerol kinase [EC:2.7.1.107]
diacylglycerol kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI000368CB08
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1447_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15266..16150)
DNA (885bp) protein (295aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] id=12493027 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2]
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000255|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000255|HAMAP-Rule:MF_00713}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="
Displaying 16 items

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