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SCNpilot_expt_1000_bf_scaffold_1508

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1508_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70..1071
DNA (1002bp) protein (334aa)
N-acetylglucosamine kinase (EC:2.7.1.59); K00884 N-acetylglucosamine kinase [EC:2.7.1.59] rbh
fructokinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E6DE0 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1508_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1078..2382)
DNA (1305bp) protein (435aa)
NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
NADH dehydrogenase {ECO:0000313|EMBL:AAZ98173.1}; EC=1.6.99.3 {ECO:0000313|EMBL:AAZ98173.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F4BDB rbh
SCNpilot_expt_1000_bf_scaffold_1508_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2530..4038
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BB527 rbh
hypothetical protein; K06915
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1508_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4129..4917)
DNA (789bp) protein (263aa)
indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] rbh
indole-3-glycerol-phosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EAA8C rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1508_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4923..5954)
DNA (1032bp) protein (344aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] rbh
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
anthranilate phosphoribosyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000381FA9D rbh
SCNpilot_expt_1000_bf_scaffold_1508_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5951..6520)
DNA (570bp) protein (190aa)
anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] rbh
anthranilate synthase subunit II n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FAA0C rbh
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:AAZ98177.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1508_7
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6710..7183
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 6 str. Femo RepID=D9PB84_ACTPL
Uncharacterized protein {ECO:0000313|EMBL:EFL80900.1}; TaxID=754256 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus pleuropneumoniae serovar 6 str. Femo.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1508_8
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..7959)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00035C4219
Uncharacterized protein {ECO:0000313|EMBL:GAO01826.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1508_9
unknown

Not on your lists

comp(8029..8475)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1508_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8518..8961)
DNA (444bp) protein (148aa)
integrase n=1 Tax=Oceanimonas smirnovii RepID=UPI0003696BB3
integrase family protein
Integrase {ECO:0000313|EMBL:AKC80591.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
SCNpilot_expt_1000_bf_scaffold_1508_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9277..10545)
DNA (1269bp) protein (423aa)
sulfide-quinone reductase (EC:1.-.-.-); K00540 [EC:1.-.-.-] rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003762F3B rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1508_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10709..12004
DNA (1296bp) protein (432aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F1A2C rbh
Fis family transcriptional regulator rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1508_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12158..13633)
DNA (1476bp) protein (492aa)
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] rbh
Anthranilate synthase component I id=1350887 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1508_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13750..14433)
DNA (684bp) protein (228aa)
cbbZ; phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] rbh
Phosphoglycolate phosphatase id=1350886 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1508_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14507..14761)
DNA (255bp) protein (85aa)
cbbE; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=12495393 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cbbE; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 15 items

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