name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1529_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..488
|
RNA polymerase sigma factor RpoD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGA9_THIDA
carbamoyl-phosphate synthase L chain, ATP-binding; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1529_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
880..1380
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381D4D8
hypothetical protein
Tax=CG_Hydro_01
|
|
SCNpilot_expt_1000_bf_scaffold_1529_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1714..2298
|
dihydroorotate oxidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037201D8
rbh
slmA, ttk; nucleoid occlusion protein; K05501 TetR/AcrR family transcriptional regulator
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2286..3056)
|
molybdopterin biosynthesis protein MoeB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FCE1C
rbh
adenylyltransferase
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3071..3466)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382D715
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3551..4957)
|
peptidase S41A, protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
rbh
peptidase S41 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BD57E
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4959..6209)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037617E1
rbh
M23 family peptidase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6239..7780)
|
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
rbh
phosphoglyceromutase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DFE07
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7950..8273
|
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=12493240 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8506..9546
|
RND transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000375DF06
rbh
secretion protein HlyD
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9559..12780
|
multidrug transporter AcrB n=1 Tax=Thiobacillus denitrificans RepID=UPI000375A15F
rbh
acriflavin resistance protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12770..12988
|
sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036FA446
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13001..13417
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003637DEF
rhodanese-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13427..13690
|
glutaredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F6436
glutaredoxin, GrxC; K03676 glutaredoxin 3
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13760..14188
|
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D8A71
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14253..14768
|
preprotein translocase subunit SecB n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CEAD1
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15141..16127
|
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
rbh
glycerol-3-phosphate dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003601BC5
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_18
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16187..17590)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DDAC1
rbh
virulence factor family protein
rbh
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_19
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17602..20196)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7F66
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA92223.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1529_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20305..21507)
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ05_THIDA
rbh
hypothetical protein; K02004 putative ABC transport system permease protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ97365.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1529_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21507..22211)
|
ABC transporter related id=1319185 bin=GWE1_T_denit_62_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
ABC transporter; K02003 putative ABC transport system ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_22
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22208..23503)
|
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M672_GEODF
rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
rbh
Efflux pump, RND family, membrane fusion protein {ECO:0000313|EMBL:ACM21860.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1529_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23500..24993)
|
RND transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036886CF
rbh
NodT family RND efflux system outer membrane lipoprotein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25106..26056
|
cytochrome C biogenesis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003758715
rbh
heat shock protein DnaJ domain-containing protein; K05516 curved DNA-binding protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1529_25
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26060..26362
|
MerR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D2063
Uncharacterized protein {ECO:0000313|EMBL:EXI68650.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
transcriptional regulatory protein, MerR family
|
|
SCNpilot_expt_1000_bf_scaffold_1529_26
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26440..26859
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037892C3
Maebl {ECO:0000313|EMBL:CDY77117.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
|