ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1584

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1584_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227..499
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E26E5
competence protein ComEA; K02237 competence protein ComEA
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1584_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

659..1435
DNA (777bp) protein (259aa)
zinc/iron permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000363172F rbh
ZIP Zinc transporter rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1584_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1367..1591)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CF555
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1584_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1618..2949
DNA (1332bp) protein (444aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
ribosomal protein S12 methylthiotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003779D5F rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1584_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2957..3955)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375FF67 rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1584_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3987..4415
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F1431
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1584_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4460..5704
DNA (1245bp) protein (415aa)
cell division protein FtsX n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F2A7 rbh
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1584_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5697..6377
DNA (681bp) protein (227aa)
lipoprotein releasing system, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000374397D rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1584_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6390..8738
DNA (2349bp) protein (783aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=12495426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC rbh
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1584_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8731..10872
DNA (2142bp) protein (714aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] rbh
GTP pyrophosphokinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7756 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1584_11
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10922..11800
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DDA1C rbh
Peroxidase {ECO:0000313|EMBL:ETM63585.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
Dyp-type peroxidase; K07223 putative iron-dependent peroxidase
SCNpilot_expt_1000_bf_scaffold_1584_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11797..12234
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D3296
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1584_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12247..13293)
DNA (1047bp) protein (349aa)
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-] rbh
tRNA 2-selenouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA849 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1584_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13520..13693)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EC63F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1584_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13820..14161)
DNA (342bp) protein (114aa)
single-stranded DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380D05B
smpB; SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 15 items

View Taxonomy