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SCNpilot_expt_1000_bf_scaffold_11103

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11103_1
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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comp(312..1502)
DNA (1191bp) protein (397aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] rbh
tyrosyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C6148 rbh
SCNpilot_expt_1000_bf_scaffold_11103_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1662..2978
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000371AF12 rbh
peptidase family protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11103_3
unknown

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comp(2813..3280)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11103_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3503..4066
DNA (564bp) protein (188aa)
anmK, ydhH; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
anhydro-N-acetylmuramic acid kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A220D
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11103_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4180..4530)
DNA (351bp) protein (117aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ERPA_THIDA
HesB-like protein; K15724 iron-sulfur cluster insertion protein
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000255|HAMAP-Rule:MF_01380}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_11103_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4628..5656)
DNA (1029bp) protein (343aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B0D5A
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11103_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5762..6154)
DNA (393bp) protein (131aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=12498490 bin=THIO_MID species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11103_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6164..6598)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Thiobacillus denitrificans RepID=UPI000373A138
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 8 items

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