name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3311_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..537
|
LexA repressor id=1324497 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
627..1277
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA78E
rbh
McbC-like oxidoreductase for polypeptide thioester cyclization
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1459..1989
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E6C64
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2117..2734)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C985B
rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2846..4006)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361E8C9
rbh
Hydrogenase (NiFe) small subunit HydA {ECO:0000313|EMBL:EIJ36041.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hydrogenase (NiFe) small subunit HydA
|
|
SCNpilot_expt_1000_bf_scaffold_3311_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4121..4660)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003821AC0
rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4657..5571)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037152EB
rbh
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5622..5969)
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BCF46
transmembrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5969..6742)
|
peptidase M48 Ste24p n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D16D2
rbh
hypothetical protein
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6792..7148)
|
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000255|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811}; Short=THDP succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811};; Short=THP succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811};; Short=Tetrahydropicolinate succinylase {ECO:0000255|HAMAP-Rule:MF_00811};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydro
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=DAPD_THIDA
|
|
SCNpilot_expt_1000_bf_scaffold_3311_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7625..8839)
|
succinyldiaminopimelate transaminase (EC:2.6.1.11); K14267 N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
succinyldiaminopimelate aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003744CAF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8881..9783
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363BA38
rbh
integral membrane protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9776..10153
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376C7DF
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_14
unknown
|
Not on your lists |
comp(10192..10407)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3311_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10621..11892)
|
sugar kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003616A39
FGGY family sugar kinase
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11897..12316)
|
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035CBE46
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3311_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12405..15806
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003669B66
rbh
condensin subunit Smc; K03529 chromosome segregation protein
rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|