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SCNpilot_expt_1000_bf_scaffold_4148

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4148_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..836)
DNA (834bp) protein (278aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
serine hydroxymethyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EE4A0
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4148_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1184..2272
DNA (1089bp) protein (363aa)
ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368BF1B rbh
transporter, periplasmic component
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4148_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2275..2898
DNA (624bp) protein (208aa)
putative ubiquinone biosynthesis monooxygenase Coq7; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-] rbh
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604BAC rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4148_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2976..4415
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B4D33 rbh
signal transduction protein rbh
Predicted signal transduction protein containing EAL and modified HD-GYP domains {ECO:0000313|EMBL:AAZ98112.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_4148_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4510..5268
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003797EE7 rbh
hypothetical protein; K09122 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4148_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5314..5784
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003740147 rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_4148_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5858..6253
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D55E3
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4148_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6322..6633)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AC315
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98107.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_4148_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6675..7775)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036796AA
Elongator protein 3/MiaB/NifB
UPF0313 protein Tbd_2153 {ECO:0000256|HAMAP-Rule:MF_01251}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 9 items

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