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SCNpilot_expt_1000_bf_scaffold_6360

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6360_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..190)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366D9A8
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_6360_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235..1152)
DNA (918bp) protein (306aa)
ornithine carbamoyltransferase (EC:2.1.3.3) id=12494096 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ornithine carbamoyltransferase (EC:2.1.3.3) rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_6360_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1152..2333)
DNA (1182bp) protein (394aa)
acetylornithine aminotransferase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] rbh
acetylornithine aminotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000376449C rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_6360_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2422..2922)
DNA (501bp) protein (167aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7D93 rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_6360_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2933..3028)
DNA (96bp) protein (32aa)
Putative uncharacterized protein id=1342214 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_6360_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3177..3458
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003718EC6
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_6360_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3524..3787)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F4BB
30S ribosomal protein S20P; K02968 small subunit ribosomal protein S20
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_6360_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3971..5512
DNA (1542bp) protein (514aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003774709
virulence factor MVIN-like protein; K03980 virulence factor
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_6360_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5555..6481
DNA (927bp) protein (309aa)
FMN adenylyltransferase / riboflavin kinase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] rbh
FMN adenylyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D6F43 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_6360_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6495..7964
DNA (1470bp) protein (490aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
isoleucyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382B0EE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 10 items

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