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SCNpilot_expt_1000_bf_scaffold_21915

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_21915_1
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..535)
DNA (534bp) protein (178aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_38_11_curated
SCNpilot_expt_1000_bf_scaffold_21915_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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757..1134
DNA (378bp) protein (126aa)
2-oxoglutarate dehydrogenase E2 component (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
dihydrolipoamide succinyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003705B1C
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21915_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1148..1729
DNA (582bp) protein (194aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003788AD8
ATP-binding ABC transporter protein; K02065 putative ABC transport system ATP-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21915_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1726..1947
DNA (222bp) protein (74aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003788AD8
ABC transporter
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_21915_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1953..2297)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003800893
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21915_6
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2334..2732)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C30F9
Glyoxalase/bleomycin resistance protein/dioxygenase; K07032
Tax=GWA2_Gallionellales_59_43_curated
SCNpilot_expt_1000_bf_scaffold_21915_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2758..2907)
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FBB42
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21915_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3552..4139)
DNA (588bp) protein (196aa)
Outer membrane lipoprotein id=1342615 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane lipoprotein; K03098 outer membrane lipoprotein Blc
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_21915_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4212..4565)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003771AD8
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21915_10
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4570..4830)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D4D58
DoxX family protein {ECO:0000313|EMBL:KFX70324.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
DoxX family protein; K15977 putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_21915_11
unknown

Not on your lists

comp(4779..4934)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D4D58
SCNpilot_expt_1000_bf_scaffold_21915_12

Not on your lists

comp(5088..5408)
DNA (321bp) protein (107aa)
multidrug transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003600367
Uncharacterized protein {ECO:0000313|EMBL:KKO09806.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_expt_1000_bf_scaffold_21915_13
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5552..6181)
DNA (630bp) protein (210aa)
cytochrome B561; K12262 cytochrome b561 id=12493161 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Cytochrome B561 {ECO:0000313|EMBL:EHR39712.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella jeotgali KCTC 22429.;"
cytochrome B561; K12262 cytochrome b561
SCNpilot_expt_1000_bf_scaffold_21915_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6291..6593)
DNA (303bp) protein (101aa)
Amino acid transporter LysE n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7ACJ7_PSEST
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24386.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
amino acid transporter LysE
Displaying 14 items

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