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SCNpilot_expt_1000_bf_scaffold_1156

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1156_1
unknown

Not on your lists

3..83
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_2
unknown

Not on your lists

330..557
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

722..1423
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371992A
31 kDa outer-membrane immunogenic protein {ECO:0000313|EMBL:CDX21605.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1156_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1592..1807
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6W4_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH87434.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_1000_bf_scaffold_1156_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2114..2608)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HAF2_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHJ97425.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1156_6
unknown

Not on your lists

2646..2906
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3037..4377
DNA (1341bp) protein (447aa)
Putative cytosine permease CodB n=1 Tax=Variovorax paradoxus B4 RepID=T1X539_VARPD rbh
codB; putative cytosine permease CodB rbh
Putative cytosine permease CodB {ECO:0000313|EMBL:AGU47280.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_1000_bf_scaffold_1156_8
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4489..5481
DNA (993bp) protein (331aa)
Formamidase (EC:3.5.1.49) rbh
Formamidase {ECO:0000256|HAMAP-Rule:MF_01243}; EC=3.5.1.49 {ECO:0000256|HAMAP-Rule:MF_01243};; Formamide amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01243}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
Formamidase n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SK57_9CYAN rbh
SCNpilot_expt_1000_bf_scaffold_1156_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5593..6738
DNA (1146bp) protein (382aa)
Aliphatic amidase expression-regulating protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HT94_ACHXA
amiC1; aliphatic amidase expression-regulating protein 1; K01999 branched-chain amino acid transport system substrate-binding protein
Aliphatic amidase expression-regulating protein 1 {ECO:0000313|EMBL:ADP13720.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_1156_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6735..7361
DNA (627bp) protein (209aa)
Response regulator receiver/ANTAR domain protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HT95_ACHXA
Response regulator receiver protein {ECO:0000313|EMBL:KGY27380.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
response regulator receiver/ANTAR domain-containing protein 1
SCNpilot_expt_1000_bf_scaffold_1156_11
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7877..8770)
DNA (894bp) protein (298aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T4A9_JANMA rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:EYD75324.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1156_12
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8786..9745)
DNA (960bp) protein (320aa)
ansA2; L-asparaginase (EC:3.5.1.1); K01424 L-asparaginase [EC:3.5.1.1] rbh
L-asparaginase {ECO:0000313|EMBL:ABR89786.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABR89786.1};; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
L-asparaginase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T4B0_JANMA rbh
SCNpilot_expt_1000_bf_scaffold_1156_13
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9878..10681)
DNA (804bp) protein (268aa)
ABC transporter related protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5P2_METTP
ABC transporter related
ABC transporter related protein {ECO:0000313|EMBL:ABK14016.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SCNpilot_expt_1000_bf_scaffold_1156_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10684..11511)
DNA (828bp) protein (276aa)
ABC transporter, membrane spanning protein (Nitrate/sulfonates) id=3348591 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative sulfonate ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_expt_1000_bf_scaffold_1156_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11523..12581)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036BC4FC
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCQ97045.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1156_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12732..13046)
DNA (315bp) protein (105aa)
NIPSNAP family containing protein n=1 Tax=Rhizobium giardinii RepID=UPI0003727519
Uncharacterized protein {ECO:0000313|EMBL:KGF79177.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1156_17

Not on your lists

comp(13098..13856)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured prokaryote RepID=H5SKC2_9ZZZZ
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:BAL56608.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_1156_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(13868..14956)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI000368B6AB rbh
mandelate racemase / L-alanine-DL-glutamate epimerase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
SCNpilot_expt_1000_bf_scaffold_1156_19
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15294..15878
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMV2_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS51279.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1156_20
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16038..16532)
DNA (495bp) protein (165aa)
Transposase orfB n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDH4_9SPHN
transposase orfB
Transposase orfB {ECO:0000313|EMBL:ABC65072.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
SCNpilot_expt_1000_bf_scaffold_1156_21
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16941..18275
DNA (1335bp) protein (445aa)
Integrase family protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IAF8_METNO rbh
Integrase family protein {ECO:0000313|EMBL:CDX30877.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
integrase family protein rbh
SCNpilot_expt_1000_bf_scaffold_1156_22
unknown

Not on your lists

18272..19012
DNA (741bp) protein (247aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_23
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19128..19304
DNA (177bp) protein (59aa)
UPI0003D00DD3 related cluster n=1 Tax=unknown RepID=UPI0003D00DD3
Regulatory protein {ECO:0000313|EMBL:ESZ56518.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
SCNpilot_expt_1000_bf_scaffold_1156_24
unknown

Not on your lists

19318..19518
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_25
Mesorhizobium sp. LNJC395A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19515..19781
DNA (267bp) protein (89aa)
UPI0003CF6AB8 related cluster n=1 Tax=unknown RepID=UPI0003CF6AB8
Uncharacterized protein {ECO:0000313|EMBL:ESY16206.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1156_26
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19778..20263
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00030CBA8E
Uncharacterized protein {ECO:0000313|EMBL:ESZ56647.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1156_27
unknown

Not on your lists

20260..20499
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_28
unknown

Not on your lists

20601..20870
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_29
unknown

Not on your lists

comp(20967..21176)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1156_30
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21355..21834
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ERP2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX10217.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
Displaying items 1-30 of 68 in total

View Taxonomy