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SCNpilot_expt_1000_bf_scaffold_918

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_918_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..463)
DNA (462bp) protein (154aa)
Chaperone protein DnaK id=1348027 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molecular chaperone protein DnaK; K04043 molecular chaperone DnaK
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_918_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1523..2044)
DNA (522bp) protein (174aa)
molecular chaperone GrpE n=1 Tax=Thiobacillus thioparus RepID=UPI00036A8592 rbh
molecular chaperone protein GrpE; K03687 molecular chaperone GrpE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_3
unknown

Not on your lists

2528..2725
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_918_4
unknown

Not on your lists

comp(2846..3367)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_918_5
unknown

Not on your lists

comp(3809..4087)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_918_6
unknown

Not on your lists

comp(4102..4608)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_918_7

Not on your lists

comp(4623..5573)
DNA (951bp) protein (317aa)
Major head subunit n=1 Tax=Emiliania huxleyi virus PS401 RepID=G8DH47_9VIRU
Major head subunit {ECO:0000313|EMBL:AET73294.1}; TaxID=754068 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Emiliania huxleyi virus PS401.;"
Phage major capsid protein
SCNpilot_expt_1000_bf_scaffold_918_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5575..8061)
DNA (2487bp) protein (829aa)
Phage-related minor tail protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CRC9_PSEST
Phage-related minor tail protein
Phage-related minor tail protein {ECO:0000313|EMBL:AFM32636.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri CCUG 29243.;"
SCNpilot_expt_1000_bf_scaffold_918_9
unknown

Not on your lists

comp(8051..8443)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_918_10
unknown

Not on your lists

comp(8466..8648)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_918_11
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9228..9917)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GG54_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01236.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_expt_1000_bf_scaffold_918_12
unknown

Not on your lists

comp(9908..10264)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371E933
SCNpilot_expt_1000_bf_scaffold_918_13
unknown

Not on your lists

comp(10442..10690)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003688C57
SCNpilot_expt_1000_bf_scaffold_918_14
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10870..12069)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375ED32 rbh
Integrase {ECO:0000313|EMBL:EPX98416.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
Phage integrase rbh
SCNpilot_expt_1000_bf_scaffold_918_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12267..13592)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A57BA rbh
putative RNA polymerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13579..14058)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A5A91 rbh
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EDP66751.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
3-demethylubiquinone-9 3-methyltransferase
SCNpilot_expt_1000_bf_scaffold_918_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14086..14445)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C73F2
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14459..14851)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381CEC4
AzgA family major facilitator superfamily protein; K07032
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14945..15301)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F7045
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15418..15885)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003640B6E
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16006..16425)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EEF4D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_918_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16735..17484
DNA (750bp) protein (250aa)
group 2 family glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
dolichol-phosphate mannosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000377758F rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17485..18201
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003648E86 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18173..19783
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EB7A3 rbh
putative glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_918_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19790..20035)
DNA (246bp) protein (82aa)
RNA-binding protein Hfq n=1 Tax=Thiobacillus RepID=UPI00037A4DDE
RNA-binding protein Hfq; K03666 host factor-I protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20084..20902)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C32EC rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_918_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20914..21177)
DNA (264bp) protein (88aa)
BolA family protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E6A87
putative stress-induced morphogen BolA; K05527 BolA protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21174..21476)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381743E
YCII-related; K09780 hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21476..22108)
DNA (633bp) protein (211aa)
septation protein A n=1 Tax=Thiobacillus thioparus RepID=UPI0003801719 rbh
intracellular septation protein A; K06190 intracellular septation protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_918_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22216..23079
DNA (864bp) protein (288aa)
phosphoesterase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9D57 rbh
phosphoesterase PHP; K07053 rbh
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 58 in total

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