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SCNpilot_expt_1000_bf_scaffold_8086

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8086_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..491)
DNA (489bp) protein (163aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
hydroxyacylglutathione hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000363BAC9
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8086_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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521..1258
DNA (738bp) protein (246aa)
methyltransferase type 11 n=1 Tax=Thiobacillus thioparus RepID=UPI000369C54A rbh
methyl-transferase rbh
Methyl-transferase {ECO:0000313|EMBL:AAZ97617.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_8086_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1248..1694
DNA (447bp) protein (149aa)
ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RNaseH ribonuclease n=1 Tax=Thiobacillus thioparus RepID=UPI00036361A5 rbh
SCNpilot_expt_1000_bf_scaffold_8086_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2410
DNA (705bp) protein (235aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA polymerase III subunit epsilon n=1 Tax=Thiobacillus thioparus RepID=UPI00035EA905 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8086_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2407..3363
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003816AB3 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8086_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3363..5438
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003743F6F rbh
diguanylate cyclase/phosphodiesterase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8086_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5454..5663)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A3624
copper ion binding protein; K07213 copper chaperone
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8086_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5760..6068)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DCF46
anti-sigma-28 factor FlgM; K02398 negative regulator of flagellin synthesis FlgM
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8086_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6146..7000)
DNA (855bp) protein (285aa)
phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036390DC rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8086_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7009..7437)
DNA (429bp) protein (143aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
transcription-repair coupling factor n=1 Tax=Thiobacillus thioparus RepID=UPI00036D1DB7
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 10 items

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