ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8883

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8883_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..261
DNA (261bp) protein (87aa)
long-chain fatty-acid-CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI0003669576
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8883_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

291..1520
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003674896
long chain fatty acid transport protein; K06076 long-chain fatty acid transport protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8883_3
unknown

Not on your lists

1594..2586
DNA (993bp) protein (331aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8883_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2872..4044
DNA (1173bp) protein (391aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] rbh
aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000372D26F rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8883_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4657..5331)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382E708 rbh
DNA repair protein RadC; K03630 DNA repair protein RadC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8883_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5365..6570
DNA (1206bp) protein (402aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5 4.1.1.36); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
phosphopantothenate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E08AA rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8883_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6587..7033
DNA (447bp) protein (149aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23]
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E91CC
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8883_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..8659
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003693078 rbh
diguanylate cyclase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8883_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8761..9207)
DNA (447bp) protein (149aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003755283
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 9 items

View Taxonomy