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SCNpilot_expt_1000_bf_scaffold_11087

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11087_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..758)
DNA (756bp) protein (252aa)
nodulation protein NodJ n=1 Tax=Thiobacillus thioparus RepID=UPI0003738253 rbh
ABC-2 type transporter, NodJ; K09694 lipooligosaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_11087_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(763..1449)
DNA (687bp) protein (229aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003813636
ABC-2 type transporter ATPase; K09695 lipooligosaccharide transport system ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11087_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1446..1649)
DNA (204bp) protein (68aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003813636
ABC-2 type transporter ATPase; K09695 lipooligosaccharide transport system ATP-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_11087_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1643..2245)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361CAA0 rbh
hypothetical protein; K07018 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_11087_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2268..2585)
DNA (318bp) protein (106aa)
ferredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037D7A1A
putative ferredoxin 2fe-2s protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_11087_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2582..2968)
DNA (387bp) protein (129aa)
hypothetical protein id=12494180 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11087_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3189..3812
DNA (624bp) protein (208aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382BEDB rbh
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_11087_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3864..4856
DNA (993bp) protein (331aa)
chain-length determining protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003760237
polysaccharide chain length determinant protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 8 items

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