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SCNpilot_expt_1000_bf_scaffold_3334

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3334_1
unknown

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3334_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1568..2668
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377CC87 rbh
Cl-channel voltage-gated family protein
Tax=CG_Beta_01
SCNpilot_expt_1000_bf_scaffold_3334_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2730..2984
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EE760
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2981..3745
DNA (765bp) protein (255aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D9EF1 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3891..4718
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1C3B rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4745..5584)
DNA (840bp) protein (280aa)
cobyrinic acid a,c-diamide synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CB8DD rbh
cobyrinic acid a,c-diamide synthase; K04562 flagellar biosynthesis protein FlhG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5581..6375)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B061B rbh
diguanylate cyclase rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..7035)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037770C5
putative dissimilatory sulfite reductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..7518)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003755BFC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7571..8221
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382ACE9 rbh
flavin reductase-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8311..9516
DNA (1206bp) protein (402aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000379BEA1 rbh
putative transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_12
unknown

Not on your lists

comp(9583..9762)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3334_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9839..10918
DNA (1080bp) protein (360aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
isopropylmalate isomerase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C9FB4
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3334_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10932..11054
DNA (123bp) protein (41aa)
putative small secreted protein id=12493944 bin=THIO_HI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_3334_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11055..11693
DNA (639bp) protein (213aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=12493945 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3334_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11752..12264
DNA (513bp) protein (171aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F7046
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 16 items

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