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SCNpilot_expt_1000_bf_scaffold_9094

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9094_1
unknown

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comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9094_2
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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260..1177
DNA (918bp) protein (306aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037774FC rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
SCNpilot_expt_1000_bf_scaffold_9094_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1174..1908
DNA (735bp) protein (245aa)
putative transcriptional acitvator, Baf; K03525 type III pantothenate kinase [EC:2.7.1.33] rbh
Type III pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000255|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000255|HAMAP-Rule:MF_01274}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DDF93 rbh
SCNpilot_expt_1000_bf_scaffold_9094_4
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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1905..2555
DNA (651bp) protein (217aa)
hypothetical protein id=12493737 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAI78482.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9094_5
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2550..3419)
DNA (870bp) protein (290aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003646156 rbh
SCNpilot_expt_1000_bf_scaffold_9094_6
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3416..4021)
DNA (606bp) protein (202aa)
Probable chorismate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000256|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000256|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000256|HAMAP-Rule:MF_01632};; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
chorismate lyase (EC:4.1.3.-); K03181 chorismate--pyruvate lyase [EC:4.1.3.40]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E09F4 rbh
SCNpilot_expt_1000_bf_scaffold_9094_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3985..5301)
DNA (1317bp) protein (439aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Thiobacillus thioparus RepID=UPI00036200D0
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_9094_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5483..6001)
DNA (519bp) protein (173aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Thiobacillus thioparus RepID=UPI00036200D0
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 8 items

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