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SCNpilot_expt_1000_bf_scaffold_9507

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9507_1
unknown

Not on your lists

2..118
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9507_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115..1038
DNA (924bp) protein (308aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
glucose-1-phosphate thymidylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD75E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_9507_3
unknown

Not on your lists

comp(1149..1304)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9507_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1442..1684
DNA (243bp) protein (81aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F609D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_9507_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1681..2604
DNA (924bp) protein (308aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
dTDP-4-dehydrorhamnose reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003746292
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_9507_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3075..3614
DNA (540bp) protein (180aa)
UDP-galactose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI000369510D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_9507_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..3999
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHH0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62009.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9507_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3996..4367
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B224A
hypothetical protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
SCNpilot_expt_1000_bf_scaffold_9507_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4386..4979)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DA610
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97725.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_9507_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5009..6703)
DNA (1695bp) protein (565aa)
exonuclease RecJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
single-stranded DNA exonuclease n=1 Tax=Thiobacillus thioparus RepID=UPI0003649E06 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_9507_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6807..8255
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003762D84 rbh
putative flavodoxin oxidoreductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_9507_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8256..8705
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E73F7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_9507_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8687..8962)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371B4B0
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_9507_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9001..9792)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B8EE6
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 14 items

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