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SCNpilot_expt_1000_bf_scaffold_4524

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4524_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..845)
DNA (843bp) protein (281aa)
metal dependent phosphohydrolase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
guanosine-3'''',5''''-bis(diphosphate) 3''''-pyrophosphohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CDB3A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_4524_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1340..2122
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Xanthomonas vasicola RepID=UPI00036A911D
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2103..2306)
DNA (204bp) protein (68aa)
RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega id=1342769 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2335..2964)
DNA (630bp) protein (210aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] rbh
guanylate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CFB1E rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2981..3847)
DNA (867bp) protein (289aa)
stress-induced protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820D8A rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3961..4890
DNA (930bp) protein (310aa)
Serine/threonine protein kinase; K00924 [EC:2.7.1.-]
serine/threonine protein kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00035EEADB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_4524_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5132..6040
DNA (909bp) protein (303aa)
phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B700F rbh
protein serine/threonine phosphatase rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_4524_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6610..6813
DNA (204bp) protein (68aa)
RNAse PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56]
ribonuclease PH n=1 Tax=Thiobacillus thioparus RepID=UPI000377B2C9
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6810..7400
DNA (591bp) protein (197aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
nucleoside-triphosphate diphosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003827529 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7393..8553
DNA (1161bp) protein (387aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
coproporphyrinogen III oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI0003637046 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_4524_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8575..11169)
DNA (2595bp) protein (865aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003608DC7 rbh
diguanylate cyclase/phosphodiesterase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_4524_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11332..12054)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D99BF rbh
RNA-binding S4 domain-containing protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_4524_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12223..13011
DNA (789bp) protein (263aa)
dienelactone hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000381359F rbh
dienelactone hydrolase family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_4524_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13004..13651
DNA (648bp) protein (216aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=12493763 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_4524_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13884..14036
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003744617
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 15 items

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