ggKbase home page

SCNpilot_expt_1000_bf_scaffold_21460

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_21460_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..341
DNA (339bp) protein (113aa)
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE id=12495336 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21460_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

695..853
DNA (159bp) protein (53aa)
transcription antitermination protein NusG n=1 Tax=Thiobacillus thioparus RepID=UPI000364928B
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21460_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1003..1422
DNA (420bp) protein (140aa)
50S ribosomal protein L11 n=1 Tax=Thiobacillus thioparus RepID=UPI000373428D
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21460_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1424..2119
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Thiobacillus thioparus RepID=UPI00037B74CA rbh
50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21460_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2394..2900
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=1 Tax=Thiobacillus thioparus RepID=UPI00037236CC
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21460_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2973..3356
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=12495331 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_21460_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3527..4630)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZFZ2_9XANT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
SCNpilot_expt_1000_bf_scaffold_21460_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4857..6887
DNA (2031bp) protein (677aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037807C3
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_21460_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6854..7141
DNA (288bp) protein (96aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037807C3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 9 items

View Taxonomy