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SCNpilot_expt_1000_bf_scaffold_813

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_813_1
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1469)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347BEFA rbh
Phage tail sheath family protein {ECO:0000313|EMBL:AJY39215.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
phage tail sheath family protein rbh
SCNpilot_expt_1000_bf_scaffold_813_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1507..1797)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WFG7_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_813_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2026..3471)
DNA (1446bp) protein (482aa)
Thiol protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYX7_9GAMM rbh
Thiol protease {ECO:0000313|EMBL:EIL92418.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_813_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3553..4701)
DNA (1149bp) protein (383aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NDV4_9GAMM
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGG87653.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_813_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5102..5878
DNA (777bp) protein (259aa)
Flavodoxin reductase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY2_9GAMM rbh
Flavodoxin reductase family protein {ECO:0000313|EMBL:EIL92423.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
flavodoxin reductase family protein rbh
SCNpilot_expt_1000_bf_scaffold_813_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6077..6559
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVW6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91357.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_813_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6569..7237)
DNA (669bp) protein (223aa)
Channel protein, hemolysin III family n=1 Tax=Rhodanobacter denitrificans RepID=I4WFG1_9GAMM rbh
channel protein, hemolysin III family rbh
Channel protein, hemolysin III family {ECO:0000313|EMBL:AGG87648.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_813_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7332..7766)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92426.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_813_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8000..8656
DNA (657bp) protein (219aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH54_9GAMM
TonB family protein {ECO:0000313|EMBL:EIL98795.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TonB family protein
SCNpilot_expt_1000_bf_scaffold_813_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8949..9527
DNA (579bp) protein (193aa)
Cysteine dioxygenase type I n=1 Tax=Rhodanobacter denitrificans RepID=I4WFF9_9GAMM
Cysteine dioxygenase type I
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_813_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9560..10927
DNA (1368bp) protein (456aa)
Uncharacterized protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NAQ4_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87645.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_813_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10946..12337
DNA (1392bp) protein (464aa)
Cardiolipin synthetase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQD7_9GAMM rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG87644.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_813_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12561..12809)
DNA (249bp) protein (83aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY9_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL92430.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_813_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12758..15592)
DNA (2835bp) protein (945aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY9_9GAMM rbh
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL92430.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor protein
SCNpilot_expt_1000_bf_scaffold_813_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15938..16651)
DNA (714bp) protein (238aa)
Transcriptional regulator transcription regulator protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ0_9GAMM rbh
Transcriptional regulator transcription regulator protein {ECO:0000313|EMBL:EIL92431.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_813_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16690..17745
DNA (1056bp) protein (352aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4]
Proline racemase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ1_9GAMM
Proline racemase {ECO:0000313|EMBL:EIL92432.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_813_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17745..18845
DNA (1101bp) protein (367aa)
D-amino acid oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ2_9GAMM rbh
D-amino acid oxidase {ECO:0000313|EMBL:EIL92433.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fad dependent oxidoreductase oxidoreductase
SCNpilot_expt_1000_bf_scaffold_813_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18842..19096
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92434.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sarcosine oxidase alpha subunit
SCNpilot_expt_1000_bf_scaffold_813_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19089..20366
DNA (1278bp) protein (426aa)
Oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ4_9GAMM rbh
Oxidoreductase {ECO:0000313|EMBL:EIL92435.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
oxidoreductase
SCNpilot_expt_1000_bf_scaffold_813_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20388..21293
DNA (906bp) protein (302aa)
dapA2; dihydroxydipicolinate synthetase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ5_9GAMM
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EIL92436.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_813_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21295..22890
DNA (1596bp) protein (532aa)
aldehyde dehydrogenase (EC:1.2.1.-); K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ6_9GAMM rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL92437.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_813_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22887..24104
DNA (1218bp) protein (406aa)
proline dipeptidase transmembrane protein (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] rbh
Proline dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ7_9GAMM rbh
Proline dipeptidase {ECO:0000313|EMBL:EIL92438.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_813_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24141..25895
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A4C6F rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF47547.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_813_24
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26010..27578
DNA (1569bp) protein (523aa)
Y+L amino acid transporter 2 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SW55_XANCT rbh
Aspartate:proton symporter {ECO:0000313|EMBL:KDP88412.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
amino acid permease rbh
SCNpilot_expt_1000_bf_scaffold_813_25
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28144..28896)
DNA (753bp) protein (251aa)
Transcriptional regulator, AraC family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZ36_MYXXD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABF87206.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCNpilot_expt_1000_bf_scaffold_813_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29004..29288)
DNA (285bp) protein (95aa)
Integrase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLE1_9GAMM
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AGG88546.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_813_27
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29413..32394)
DNA (2982bp) protein (994aa)
SC10A5.17; protease; K01387 microbial collagenase [EC:3.4.24.3]
Microbial collagenase, secreted n=2 Tax=Streptomyces lividans RepID=S1SJF4_STRLI
Protease {ECO:0000313|EMBL:AIJ12816.1}; TaxID=457428 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
SCNpilot_expt_1000_bf_scaffold_813_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32567..33295)
DNA (729bp) protein (243aa)
Collagenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ8_9GAMM
Collagenase {ECO:0000313|EMBL:EIL92439.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S1A family peptidase
SCNpilot_expt_1000_bf_scaffold_813_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33633..34025)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH48_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98789.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_813_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34113..34742
DNA (630bp) protein (210aa)
Nicotinamidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH47_9GAMM rbh
Nicotinamidase {ECO:0000313|EMBL:EIL98788.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nicotinamidase-like amidase rbh
Displaying items 1-30 of 45 in total

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