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SCNpilot_expt_1000_bf_scaffold_956

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_956_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(282..3383)
DNA (3102bp) protein (1034aa)
Transposase, TnpA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHM6_9GAMM rbh
Transposase, TnpA family {ECO:0000313|EMBL:AGG89158.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
transposase, TnpA family rbh
SCNpilot_expt_1000_bf_scaffold_956_2
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3635..4021)
DNA (387bp) protein (129aa)
Transcriptional regulator, MerR family n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BIW5_9XANT
putative transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EGD07570.1}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
SCNpilot_expt_1000_bf_scaffold_956_3
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4087..4734
DNA (648bp) protein (216aa)
cation transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489424
Uncharacterized protein {ECO:0000313|EMBL:KFL37879.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
cation efflux protein
SCNpilot_expt_1000_bf_scaffold_956_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4731..6716
DNA (1986bp) protein (662aa)
High-affinity Fe2+/Pb2+ permease n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP0_9GAMM
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:AGG88872.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
high-affinity Fe2+/Pb2+ permease
SCNpilot_expt_1000_bf_scaffold_956_5
unknown

Not on your lists

comp(6643..6789)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_956_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6878..8224)
DNA (1347bp) protein (449aa)
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJE8_XANP2
Pyridine nucleotide-disulphide oxidoreductase dimerisation region {ECO:0000313|EMBL:ABS68141.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_956_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8349..10070)
DNA (1722bp) protein (574aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative mercuric reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP11_9GAMM rbh
mercuric reductase rbh
SCNpilot_expt_1000_bf_scaffold_956_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10179..10280)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFY9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88977.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_956_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10374..10802)
DNA (429bp) protein (143aa)
Putative mercury transport protein MerC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP10_9GAMM
Putative mercury transport protein MerC {ECO:0000313|EMBL:EIM01202.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MerC mercury resistance protein
SCNpilot_expt_1000_bf_scaffold_956_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10822..11100)
DNA (279bp) protein (93aa)
Mercuric transport protein periplasmic component n=1 Tax=Rhodanobacter denitrificans RepID=M4NEJ3_9GAMM
mercuric transport protein periplasmic component
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_956_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..11524)
DNA (405bp) protein (135aa)
Putative mercuric transport protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WK29_9GAMM
Putative mercuric transport protein {ECO:0000313|EMBL:EIM01200.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MerT mercuric transport protein
SCNpilot_expt_1000_bf_scaffold_956_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11565..11963
DNA (399bp) protein (133aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP07_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:EIM01199.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_956_13
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12405..12734
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000380AAA7
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12736..13407
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002ECA994 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13604..16090
DNA (2487bp) protein (829aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
ATPase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037A63E2 rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16117..17502
DNA (1386bp) protein (462aa)
Beta-lactamase domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB3_9GAMM rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EIM00605.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
beta-lactamase domain-containing protein; K07576 metallo-beta-lactamase family protein
SCNpilot_expt_1000_bf_scaffold_956_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17505..19019
DNA (1515bp) protein (505aa)
Putative thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_00703}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_00703};; TdRPase {ECO:0000256|HAMAP-Rule:MF_00703}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB4_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_956_18
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19016..19930
DNA (915bp) protein (305aa)
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:KGO99867.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KGO99867.1};; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030A3926 rbh
SCNpilot_expt_1000_bf_scaffold_956_19
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19927..22389
DNA (2463bp) protein (821aa)
D-xylulose 5-phosphate n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D85D71 rbh
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_20
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

22386..22682
DNA (297bp) protein (99aa)
Uncharacterized protein id=1961171 bin=GWD2_Chloroflexi_49_16 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
SCNpilot_expt_1000_bf_scaffold_956_21
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22679..24268
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F79AC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM50712.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein; K03688 ubiquinone biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_956_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24265..25425
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036F945D rbh
ackA1; acetate kinase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_23
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25422..25904
DNA (483bp) protein (161aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_24
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25901..26761
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036E69DE
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_25
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26758..27945
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JV49_BURVG
major facilitator transporter
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_26
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27942..28178
DNA (237bp) protein (79aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT73_PSEUP
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_27
unknown

Not on your lists

comp(28065..28346)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_956_28
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28624..29121
DNA (498bp) protein (166aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
cyclopropane fatty acyl phospholipid synthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00037E53FB
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_29
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29135..29782
DNA (648bp) protein (216aa)
hypothetical protein id=12551597 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_956_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29815..30324
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GM99_9BACT
Membrane protein {ECO:0000313|EMBL:AHX13347.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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