name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_982_1
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(139..552)
|
Putative membrane protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IU51_9BURK
SURF4 family protein {ECO:0000313|EMBL:AJZ63214.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
DoxX family protein; K15977 putative oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_982_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(806..1573)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348D2F2
Uncharacterized protein {ECO:0000313|EMBL:AIF47811.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1799..2491)
|
Universal bacterial protein YeaZ n=1 Tax=Rhodanobacter denitrificans RepID=M4NGZ6_9GAMM
rbh
universal bacterial protein YeaZ
rbh
Universal bacterial protein YeaZ {ECO:0000313|EMBL:AGG90220.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2488..3837)
|
Inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S6_9GAMM
rbh
Inner membrane protein {ECO:0000313|EMBL:EIL94467.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Inner membrane protein involved in colicin E2 resistance
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_5
unknown
|
Not on your lists |
comp(3959..4201)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_982_6
Pseudomonas sp. GM80, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4281..5093)
|
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Pseudomonas sp. GM80 RepID=J3DW70_9PSED
rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJN34369.1}; Flags: Precursor;; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM80.;"
alpha/beta fold family hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_7
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5146..5571)
|
OsmC family protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FCT0_9BURK
OsmC family protein {ECO:0000313|EMBL:EHK64035.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
OsmC family protein
|
|
SCNpilot_expt_1000_bf_scaffold_982_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5719..7347)
|
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S5_9GAMM
rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL94466.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter ATP-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7510..8343)
|
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002DB038C
rbh
Oxidoreductase {ECO:0000313|EMBL:AHX13463.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8545..9054)
|
Cytochrome p460 n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2YEX1_PSEFL
Cytochrome p460 {ECO:0000313|EMBL:EJL05474.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;"
cyp; cytochrome p460
|
|
SCNpilot_expt_1000_bf_scaffold_982_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9197..10249)
|
Putative hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) n=1 Tax=Pseudomonas fluorescens BBc6R8 RepID=V7EAH3_PSEFL
rbh
Putative hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ESW57948.1}; TaxID=463794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BBc6R8.;"
alpha/beta fold family hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_12
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10305..10910)
|
Integral membrane protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QSG2_9ACTO
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:CCK24596.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_13
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10907..12256)
|
Epoxide hydrolase-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HPA2_PSEUO
rbh
Multidrug MFS transporter {ECO:0000313|EMBL:ETM63286.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
epoxide hydrolase-like protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_14
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12772..13803)
|
Conserved hypothetical phage protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KZG3_BORA1
rbh
hypothetical protein
rbh
Conserved hypothetical phage protein {ECO:0000313|EMBL:CAJ47971.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13788..15416)
|
Conserved hypothetical phage protein (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KZG1_BORA1
rbh
ATP-dependent endonuclease {ECO:0000313|EMBL:KGH06007.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_16
Pseudomonas sp. RIT288, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15674..16975
|
Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CD82_XANCA
Putative restriction enzyme-related protein {ECO:0000313|EMBL:EZP33267.1}; TaxID=1470589 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT288.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_982_17
unknown
|
Not on your lists |
16986..17396
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_982_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17454..18200)
|
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1V5_VARPE
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU37958.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_19
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18797..21631
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
Multi-sensory box histidine kinase n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2YDK3_PSEFL
rbh
multi-sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_982_20
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21631..22002
|
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI00030B2B6B
Chemotaxis protein CheY {ECO:0000313|EMBL:KES21090.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
response regulator receiver domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_982_21
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22034..22711
|
Two component LuxR family transcriptional regulator n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HQB7_PSEUO
LuxR family transcriptional regulator {ECO:0000313|EMBL:ETM63282.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
two component LuxR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_982_22
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22744..23514)
|
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_982_23
unknown
|
Not on your lists |
23866..24375
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_982_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24249..24734)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEB6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88277.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24936..25523
|
Putative amidophosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTE3_9GAMM
rbh
putative amidophosphoribosyltransferase
rbh
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:AGG88276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25520..26179
|
Adenine specific DNA methylase Mod n=1 Tax=Rhodanobacter denitrificans RepID=M4NC80_9GAMM
adenine specific DNA methylase Mod
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:AGG88275.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_27
R_Proteobacteria_53_8, Proteobacteria, Bacteria
|
Not on your lists |
26394..27944
|
Methyltransferase n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4V062_XANC8
rbh
methyltransferase
rbh
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
|
|
SCNpilot_expt_1000_bf_scaffold_982_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27946..30456
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTE1_9GAMM
rbh
DNA/RNA helicase, superfamily II
rbh
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AGG88274.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_982_29 |
Not on your lists |
30706..31425
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB93_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04469.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_982_30
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31382..31864)
|
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WE62_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM55919.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
|