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SCNpilot_expt_1000_bf_scaffold_2487

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2487_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..287)
DNA (285bp) protein (95aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ9_9GAMM
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family {ECO:0000313|EMBL:EIL90340.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
SCNpilot_expt_1000_bf_scaffold_2487_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(284..1561)
DNA (1278bp) protein (426aa)
Putative outer membrane efflux protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ8_9GAMM
outer membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_2487_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1644..2066)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00601.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2487_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2150..2602)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00600.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative metal-binding protein
SCNpilot_expt_1000_bf_scaffold_2487_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2605..3696)
DNA (1092bp) protein (364aa)
Cytochrome c family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMA7_9GAMM rbh
Cytochrome c family protein {ECO:0000313|EMBL:EIM00599.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ketosteroid isomerase-like enzyme rbh
SCNpilot_expt_1000_bf_scaffold_2487_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3706..4728)
DNA (1023bp) protein (341aa)
Copper resistance B n=1 Tax=Rhodanobacter denitrificans RepID=I4WLA1_9GAMM rbh
uncharacterized protein involved in copper resistance rbh
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88441.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2487_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4725..6476)
DNA (1752bp) protein (584aa)
Copper-resistance protein, CopA family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLA0_9GAMM rbh
copper-resistance protein, CopA family rbh
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88440.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2487_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6580..6927)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WL99_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88439.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_2487_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7075..7410)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_2487_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7574..8488
DNA (915bp) protein (305aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rhodanobacter denitrificans RepID=M4NEQ0_9GAMM rbh
protein involved in catabolism of external DNA rbh
SCNpilot_expt_1000_bf_scaffold_2487_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8528..9043
DNA (516bp) protein (172aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NL08_9GAMM
starvation-inducible outer membrane lipoprotein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_2487_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9175..10074
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NCL5_9GAMM rbh
cation diffusion facilitator family transporter rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AGG88435.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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