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SCNpilot_expt_1000_bf_scaffold_2917

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2917_1
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3..857)
DNA (855bp) protein (285aa)
UPF0753 protein Cagg_2891 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=Y2891_CHLAD
hypothetical protein; K09822 hypothetical protein
UPF0753 protein Cagg_2891 {ECO:0000255|HAMAP-Rule:MF_01871}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_expt_1000_bf_scaffold_2917_2
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(868..2454)
DNA (1587bp) protein (529aa)
NADH dehydrogenase (quinone); K05577 NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ACA19956.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACA19956.1};; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
NADH dehydrogenase (Quinone) n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBZ6_METS4
SCNpilot_expt_1000_bf_scaffold_2917_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2559..3455
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003453F34 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB07141.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA rbh
SCNpilot_expt_1000_bf_scaffold_2917_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3546..4313)
DNA (768bp) protein (256aa)
MltA-interacting protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQE9_9GAMM rbh
MltA-interacting protein {ECO:0000313|EMBL:EIL89440.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MltA-interacting protein; K07274 outer membrane protein
SCNpilot_expt_1000_bf_scaffold_2917_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4548..5273
DNA (726bp) protein (242aa)
Dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF53_9GAMM rbh
Dehydrogenase {ECO:0000313|EMBL:EIL98094.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2917_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5437..6105
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF51_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98092.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2917_7
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6180..6905)
DNA (726bp) protein (242aa)
GTP cyclohydrolase (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] rbh
GTP cyclohydrolase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A473E rbh
GTP cyclohydrolase I family protein {ECO:0000313|EMBL:AJZ61459.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCNpilot_expt_1000_bf_scaffold_2917_8
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7029..8063)
DNA (1035bp) protein (345aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
ferrochelatase n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003734EC4 rbh
hemH; ferrochelatase rbh
SCNpilot_expt_1000_bf_scaffold_2917_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8113..8910)
DNA (798bp) protein (266aa)
deoxyribodipyrimidine photo-lyase n=1 Tax=Janthinobacterium lividum RepID=UPI000287AC55
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KHA76449.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
deoxyribodipyrimidine photolyase-like protein; K06876 deoxyribodipyrimidine photolyase-related protein
Displaying 9 items

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