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SCNpilot_expt_1000_bf_scaffold_1049

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1049_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..584
DNA (582bp) protein (194aa)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WHL3_9GAMM
acetyl-CoA carboxylase, biotin carboxylase subunit
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:AGG87515.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

706..1632
DNA (927bp) protein (309aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(LSU ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAU2_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1049_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1703..2545
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2U5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93786.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3426) rbh
SCNpilot_expt_1000_bf_scaffold_1049_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2762..3067
DNA (306bp) protein (102aa)
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM
Factor for inversion stimulation Fis, transcriptional activator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1049_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3165..4775
DNA (1611bp) protein (537aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rhodanobacter denitrificans RepID=M4NI91_9GAMM rbh
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4919..5629
DNA (711bp) protein (237aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHK8_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87510.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5652..6170)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96578.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF2782)
SCNpilot_expt_1000_bf_scaffold_1049_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6264..8999
DNA (2736bp) protein (912aa)
DNA polymerase I (EC:2.7.7.7) rbh
DNA polymerase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V0_9GAMM rbh
DNA polymerase I {ECO:0000313|EMBL:EIL93791.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_1049_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9294..9512
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93792.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1049_10
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9577..11946
DNA (2370bp) protein (790aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970, ECO:0000313|EMBL:AJP47634.1}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
DNA/RNA helicase, superfamily I n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLN7_AZOSU
DNA/RNA helicase, superfamily I
SCNpilot_expt_1000_bf_scaffold_1049_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12083..14104
DNA (2022bp) protein (674aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ6_9GAMM rbh
trypsin-like serine protease with C-terminal PDZ domain rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1049_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14129..15148)
DNA (1020bp) protein (340aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT3_9GAMM rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL96574.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily rbh
SCNpilot_expt_1000_bf_scaffold_1049_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15255..16508)
DNA (1254bp) protein (418aa)
Putative enzyme of heme biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NAK4_9GAMM rbh
putative enzyme of heme biosynthesis rbh
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:AGG87504.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16505..17686)
DNA (1182bp) protein (394aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V4_9GAMM rbh
putative enzyme of heme biosynthesis rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_expt_1000_bf_scaffold_1049_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17746..18537)
DNA (792bp) protein (264aa)
Uroporphyrinogen-III synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V5_9GAMM rbh
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EIL93796.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uroporphyrinogen-III synthase rbh
SCNpilot_expt_1000_bf_scaffold_1049_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18596..19081
DNA (486bp) protein (162aa)
Thioesterase domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT4_9GAMM
thioesterase-like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1049_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19123..19536
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1049_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19621..20067
DNA (447bp) protein (149aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAK0_9GAMM
Rhodanese-related sulfurtransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1049_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20145..21233)
DNA (1089bp) protein (363aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT7_9GAMM rbh
2-polyprenylphenol hydroxylase-like oxidoreductase rbh
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:AGG87498.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21836..22162
DNA (327bp) protein (109aa)
Serine/threonine protein kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIX6_9GAMM
Serine/threonine protein kinase {ECO:0000313|EMBL:EIL87167.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative homoserine kinase type II (protein kinase fold)
SCNpilot_expt_1000_bf_scaffold_1049_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22108..22806
DNA (699bp) protein (233aa)
Serine/threonine protein kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT9_9GAMM
putative homoserine kinase type II (protein kinase fold)
Putative homoserine kinase type II (Protein kinase fold) {ECO:0000313|EMBL:AGG87496.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22912..23346
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHU2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87493.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1049_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23454..24626
DNA (1173bp) protein (391aa)
putative SAM-dependent methyltransferase (EC:2.1.1.-) rbh
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:AGG87492.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGG87492.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative SAM-dependent methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCK7_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1049_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24738..25931)
DNA (1194bp) protein (398aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH92_9GAMM rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIL98833.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD(P)H-nitrite reductase rbh
SCNpilot_expt_1000_bf_scaffold_1049_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26057..27499
DNA (1443bp) protein (481aa)
RmuC domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH93_9GAMM rbh
RmuC domain-containing protein {ECO:0000313|EMBL:EIL98834.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1049_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27503..27715)
DNA (213bp) protein (71aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2W9_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL93810.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1049_27
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27712..28356)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL35636.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
SCNpilot_expt_1000_bf_scaffold_1049_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28508..29110
DNA (603bp) protein (201aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPZ2_9GAMM rbh
GTP cyclohydrolase I
SCNpilot_expt_1000_bf_scaffold_1049_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29113..29442
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98836.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1049_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29439..29669)
DNA (231bp) protein (77aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ64_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 37 in total

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