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SCNpilot_expt_1000_bf_scaffold_1204

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1204_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..969)
DNA (846bp) protein (282aa)
Esterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI3_9GAMM rbh
S-formylglutathione hydrolase rbh
S-formylglutathione hydrolase {ECO:0000313|EMBL:AGG88312.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1204_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1310..2971
DNA (1662bp) protein (554aa)
DNA/RNA helicase, superfamily II (EC:5.99.1.-) rbh
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI2_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1204_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2998..3384)
DNA (387bp) protein (129aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFC0_9GAMM
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGG88308.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1204_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3495..4352)
DNA (858bp) protein (286aa)
Putative metalloprotease n=1 Tax=Rhodanobacter denitrificans RepID=M4NEE2_9GAMM rbh
putative metalloprotease rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1204_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4461..4853
DNA (393bp) protein (131aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ90_9GAMM
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) {ECO:0000313|EMBL:EIM01632.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MAPEG family
SCNpilot_expt_1000_bf_scaffold_1204_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4865..5641)
DNA (777bp) protein (259aa)
Putative methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P7_9GAMM rbh
Putative methyltransferase {ECO:0000313|EMBL:EIL94788.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1204_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5763..6608
DNA (846bp) protein (282aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ89_9GAMM
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EIM01631.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative metal-dependent membrane protease
SCNpilot_expt_1000_bf_scaffold_1204_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6616..7182)
DNA (567bp) protein (189aa)
Maf-like protein UU5_15875 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPT2_9GAMM
Maf-like protein UU5_15875 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MAF protein
SCNpilot_expt_1000_bf_scaffold_1204_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7222..7752)
DNA (531bp) protein (177aa)
Acetyltransferase, GNaT family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P4_9GAMM
Acetyltransferase, GNaT family protein {ECO:0000313|EMBL:EIL94785.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1204_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7902..8372)
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhodanobacter denitrificans RepID=M4NED8_9GAMM
rRNA large subunit m3Psi methyltransferase RlmH
SCNpilot_expt_1000_bf_scaffold_1204_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8482..8868)
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ85_9GAMM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
iojap-like ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_1204_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8971..10038)
DNA (1068bp) protein (356aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P0_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL94781.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-nitropropane dioxygenase-like enzyme rbh
SCNpilot_expt_1000_bf_scaffold_1204_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10102..10290)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ83_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01625.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
pentapeptide MXKDX repeat protein
SCNpilot_expt_1000_bf_scaffold_1204_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10386..11087)
DNA (702bp) protein (234aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG8_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1204_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11108..11383)
DNA (276bp) protein (92aa)
Acetyltransferase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N7_9GAMM
putative acetyltransferase
Acetyltransferase-like protein {ECO:0000313|EMBL:EIL94778.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_1204_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11526..11951
DNA (426bp) protein (142aa)
Osmotically inducible protein OsmC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N6_9GAMM
Osmotically inducible protein OsmC {ECO:0000313|EMBL:EIL94777.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peroxiredoxin, OsmC subfamily
SCNpilot_expt_1000_bf_scaffold_1204_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11953..13035)
DNA (1083bp) protein (361aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54) rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG5_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1204_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13268..14203
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG88294.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1204_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14298..16127
DNA (1830bp) protein (610aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Nuclease-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ77_9GAMM rbh
nuclease-like protein rbh
SCNpilot_expt_1000_bf_scaffold_1204_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16285..16857)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034DE965
Relaxation protein {ECO:0000313|EMBL:EYR68777.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
relaxation protein
SCNpilot_expt_1000_bf_scaffold_1204_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16889..18310)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR87_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89728.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1204_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18335..18943)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89729.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1204_23
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19155..19760
DNA (606bp) protein (202aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQB1_PSEUU
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ADV26360.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_expt_1000_bf_scaffold_1204_24
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19757..20155
DNA (399bp) protein (133aa)
acyltransferase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036DBFE5
phospholipid/glycerol acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Displaying 24 items

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