name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1320_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..571)
|
Chaperone protein DnaK n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI86_9GAMM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chaperone protein DnaK
|
|
SCNpilot_expt_1000_bf_scaffold_1320_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(670..1203)
|
Protein GrpE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI84_9GAMM
molecular chaperone GrpE (heat shock protein)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1320_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1285..2346)
|
Heat-inducible transcription repressor hrcA n=1 Tax=Rhodanobacter denitrificans RepID=I4WXI0_9GAMM
rbh
heat-inducible transcription repressor HrcA
rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2469..4142
|
DNA repair protein RecN n=1 Tax=Rhodanobacter denitrificans RepID=M4NH33_9GAMM
rbh
DNA replication and repair protein RecN
rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4155..4790)
|
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6U4_9GAMM
rbh
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EIL95185.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1320_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4872..6485
|
Signal transduction histidine kinase, glucose-6-phosphate specific n=1 Tax=Rhodanobacter denitrificans RepID=I4WXH7_9GAMM
rbh
signal transduction histidine kinase, glucose-6-phosphate specific
rbh
Signal transduction histidine kinase, glucose-6-phosphate specific {ECO:0000313|EMBL:AGG88955.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6755..7177)
|
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI79_9GAMM
Fe2+/Zn2+ uptake regulation protein
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EIL99170.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7254..7712
|
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter denitrificans RepID=I4WXH5_9GAMM
small protein A (tmRNA-binding)
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7737..8018)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXH4_9GAMM
hypothetical protein
UPF0125 protein R2APBS1_1831 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8011..8442)
|
Oligoketide cyclase/lipid transport protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI76_9GAMM
Oligoketide cyclase/lipid transport protein {ECO:0000313|EMBL:EIL99167.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
oligoketide cyclase/lipid transport protein
|
|
SCNpilot_expt_1000_bf_scaffold_1320_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8584..9072
|
SsrA-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T8_9GAMM
rbh
SsrA-binding protein
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1320_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9119..10411)
|
Adenylosuccinate synthetase (EC:6.3.4.4)
rbh
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Adenylosuccinate synthetase n=1 Tax=Rhodanobacter denitrificans RepID=I4WV73_9GAMM
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1320_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10490..11359)
|
Protein HflC n=1 Tax=Rhodanobacter denitrificans RepID=M4ND89_9GAMM
rbh
membrane protease subunit, stomatin/prohibitin
rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11356..12426)
|
Integral membrane protease subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW33_9GAMM
rbh
Integral membrane protease subunit {ECO:0000313|EMBL:EIL91424.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
HflK protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1320_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12594..13823)
|
GTPase HflX n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW34_9GAMM
rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP-binding protein HflX
|
|
SCNpilot_expt_1000_bf_scaffold_1320_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13953..14237)
|
RNA-binding protein Hfq n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW35_9GAMM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA-binding protein Hfq
|
|
SCNpilot_expt_1000_bf_scaffold_1320_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14370..15338)
|
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
tRNA dimethylallyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLT5_9GAMM
rbh
tRNA isopentenyltransferase MiaA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1320_18
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15541..15753
|
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000371AD74
PF11903 family protein {ECO:0000313|EMBL:KCB41659.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1320_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15954..17939)
|
Peptidase S46 n=1 Tax=Rhodanobacter denitrificans RepID=M4ND84_9GAMM
Peptidase S46
Peptidase S46 {ECO:0000313|EMBL:AGG88700.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1320_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19084..20118
|
L-threonine 3-dehydrogenase (EC:1.1.1.103)
rbh
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
L-threonine 3-dehydrogenase n=2 Tax=Rhodanobacter denitrificans RepID=M4NGB9_9GAMM
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1320_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20166..21365
|
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WV84_9GAMM
|
|
SCNpilot_expt_1000_bf_scaffold_1320_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21405..22178)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND80_9GAMM
rbh
pseudouridine synthase family protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1320_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22287..22868)
|
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW42_9GAMM
rbh
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:EIL91433.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
rbh
|