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SCNpilot_expt_1000_bf_scaffold_1727

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1727_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..122
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91420.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_1000_bf_scaffold_1727_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183..677)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGD6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88718.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1727_3
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(811..1680)
DNA (870bp) protein (290aa)
Uncharacterized conserved protein UCP021525 n=1 Tax=Thiocapsa marina 5811 RepID=F9U9Q1_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_expt_1000_bf_scaffold_1727_4
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1652..2674)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U9Q0_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_expt_1000_bf_scaffold_1727_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3095..3349)
DNA (255bp) protein (85aa)
YoeB toxin protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA45_9GAMM
YoeB toxin protein {ECO:0000313|EMBL:EIL96336.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
YoeB toxin protein
SCNpilot_expt_1000_bf_scaffold_1727_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3375..3512)
DNA (138bp) protein (46aa)
Prevent-host-death family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA44_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:EIL96335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
prevent-host-death family protein
SCNpilot_expt_1000_bf_scaffold_1727_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3512..3619)
DNA (108bp) protein (36aa)
Prevent-host-death family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA44_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:EIL96335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_1000_bf_scaffold_1727_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3706..4332)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIT3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99374.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1727_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5076..5444)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_1727_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5441..6721)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W737_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_1727_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6888..7472)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89278.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_1727_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7629..8966)
DNA (1338bp) protein (446aa)
Recombination factor protein RarA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W735_9GAMM rbh
Recombination factor protein RarA {ECO:0000313|EMBL:EIL95276.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATPase; K07478 putative ATPase
SCNpilot_expt_1000_bf_scaffold_1727_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9169..12210
DNA (3042bp) protein (1014aa)
Diguanylate cyclase with beta propeller sensor n=1 Tax=Rhodanobacter denitrificans RepID=I4WXB5_9GAMM rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG89279.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
diguanylate cyclase (GGDEF) domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_1727_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12220..12909)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W733_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95274.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1727_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12917..13222)
DNA (306bp) protein (102aa)
Lipoprotein chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDN2_9GAMM
periplasmic chaperone LolA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 15 items

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