name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1763_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..438)
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UPF0042 nucleotide-binding protein UU7_04297 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T3_9GAMM
Nucleotide-binding protein UU7_04297 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative P-loop-containing kinase
|
|
SCNpilot_expt_1000_bf_scaffold_1763_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(443..1345)
|
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thioox
serine kinase of the HPr protein, regulates carbohydrate metabolism (EC:2.7.1.-)
HPr kinase/phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSD7_9GAMM
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SCNpilot_expt_1000_bf_scaffold_1763_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1551..1874)
|
Ribosomal subunit interface protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR04_9GAMM
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:AGG90210.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1763_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2030..3487)
|
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WR03_9GAMM
rbh
RNA polymerase, sigma 54 subunit, RpoN/SigL
rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1763_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3567..4286)
|
ABC transporter ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR02_9GAMM
rbh
ABC-type (unclassified) transport system, ATPase component
rbh
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:AGG90208.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1763_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4291..4857)
|
Lipopolysaccharide transport periplasmic protein LptA n=2 Tax=Rhodanobacter denitrificans RepID=M4NJC6_9GAMM
lipopolysaccharide transport periplasmic protein LptA
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:AGG90207.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1763_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4811..5488)
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Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94480.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1763_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5485..6036)
|
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQZ9_9GAMM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:AGG90205.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1763_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6103..7113)
|
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Arabinose 5-phosphate isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE4_9GAMM
rbh
KpsF/GutQ family protein
rbh
|
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SCNpilot_expt_1000_bf_scaffold_1763_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7269..7508
|
BolA superfamily transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE5_9GAMM
putative transcriptional regulator, BolA superfamily
Putative transcriptional regulator, BolA superfamily {ECO:0000313|EMBL:AGG90203.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1763_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7601..8860
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE6_9GAMM
rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1763_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8980..9720)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQZ1_9GAMM
rbh
Protein of unknown function (DUF3108)
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1763_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9720..10379)
|
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
rbh
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Phosphoribosylformylglycinamidine synthase, clade II n=1 Tax=Rhodanobacter denitrificans RepID=I4WQZ0_9GAMM
rbh
|
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SCNpilot_expt_1000_bf_scaffold_1763_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10540..11568)
|
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
rbh
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY9_9GAMM
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
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SCNpilot_expt_1000_bf_scaffold_1763_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11721..12704
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY8_9GAMM
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90194.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1763_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12701..13870
|
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U8_9GAMM
Putative permease {ECO:0000313|EMBL:EIL94489.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease
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SCNpilot_expt_1000_bf_scaffold_1763_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13867..14574
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4U9_9GAMM
rbh
regulatory inactivation of DnaA Hda protein
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
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SCNpilot_expt_1000_bf_scaffold_1763_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14519..14965)
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RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
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SCNpilot_expt_1000_bf_scaffold_1763_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15313..15969)
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GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK1_9GAMM
rbh
GTP cyclohydrolase I
rbh
|
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SCNpilot_expt_1000_bf_scaffold_1763_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16089..16625
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89801.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative outer membrane protein
|
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SCNpilot_expt_1000_bf_scaffold_1763_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16636..16968
|
Plastocyanin n=1 Tax=Rhodanobacter denitrificans RepID=I4WUU8_9GAMM
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AGG87304.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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SCNpilot_expt_1000_bf_scaffold_1763_22
unknown
|
Not on your lists |
comp(16998..17678)
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This feature has no annotations |
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SCNpilot_expt_1000_bf_scaffold_1763_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17827..18138)
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Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY5_9GAMM
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
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