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SCNpilot_expt_1000_bf_scaffold_3426

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3426_1
unknown

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3..86
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3426_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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83..1042
DNA (960bp) protein (320aa)
Nitric-oxide reductase subunit C n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWJ0_9GAMM rbh
Nitric-oxide reductase subunit C {ECO:0000313|EMBL:EIL91581.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c2 rbh
SCNpilot_expt_1000_bf_scaffold_3426_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1042..2730
DNA (1689bp) protein (563aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWJ1_9GAMM rbh
Nitric-oxide reductase subunit B {ECO:0000313|EMBL:EIL91582.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
nitric oxide reductase large subunit rbh
SCNpilot_expt_1000_bf_scaffold_3426_4
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2873..4222)
DNA (1350bp) protein (450aa)
Ferric reductase domain protein protein transmembrane component domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7N4_STAND
ferric reductase transmembrane domain-containing protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_1000_bf_scaffold_3426_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4325..4933)
DNA (609bp) protein (203aa)
Cytochrome B561 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIN0_9GAMM rbh
cytochrome B561 rbh
Cytochrome B561 {ECO:0000313|EMBL:AGG89952.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3426_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5160..5732
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYM4_9GAMM rbh
sortase-like acyltransferase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_3426_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5760..6608
DNA (849bp) protein (283aa)
Universal stress protein UspA-like protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NG87_9GAMM rbh
universal stress protein UspA-like protein rbh
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AGG89955.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3426_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6637..7410)
DNA (774bp) protein (258aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQT8_9GAMM rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:AGG89956.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3426_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8135..9709
DNA (1575bp) protein (525aa)
Nitric-oxide reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY9_9GAMM
Nitric-oxide reductase {ECO:0000313|EMBL:EIM02931.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nitric oxide reductase large subunit
SCNpilot_expt_1000_bf_scaffold_3426_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9783..10187
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJV3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89958.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3426_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11300..11917
DNA (618bp) protein (206aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY7_9GAMM
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EIM02929.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PLP-dependent enzyme, glutamate decarboxylase
SCNpilot_expt_1000_bf_scaffold_3426_12
unknown

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11935..12048
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3426_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12045..12869
DNA (825bp) protein (275aa)
Prephenate dehydrogenase/chorismate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P5_9GAMM
Prephenate dehydrogenase/chorismate mutase {ECO:0000313|EMBL:EIL93036.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prephenate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_3426_14
unknown

Not on your lists

12966..13058
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 14 items

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