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SCNpilot_expt_1000_bf_scaffold_3757

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3757_1
unknown

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2..226
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3757_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(306..1013)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMI2_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87682.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3757_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1104..1421)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97778.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3757_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1619..2599
DNA (981bp) protein (327aa)
Biotin-(Acetyl-CoA-carboxylase) ligase BirA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE86_9GAMM
birA, biotin-(acetyl-CoA-carboxylase) ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_3757_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2596..3357
DNA (762bp) protein (254aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Type III pantothenate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE85_9GAMM rbh
pantothenate kinase, type III rbh
SCNpilot_expt_1000_bf_scaffold_3757_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3390..4049
DNA (660bp) protein (220aa)
Sporulation domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH8_9GAMM
sporulation related protein
Sporulation related protein {ECO:0000313|EMBL:AGG87686.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3757_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4330..4572
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87688.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3757_8
unknown

Not on your lists

4673..4873
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3757_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5379..5657)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GQD6_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ07951.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
SCNpilot_expt_1000_bf_scaffold_3757_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6359..7720
DNA (1362bp) protein (454aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2) rbh
Tryptophan--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE79_9GAMM rbh
SCNpilot_expt_1000_bf_scaffold_3757_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7778..8101
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87692.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3757_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8264..10492
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92400.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3757_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10571..11089
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE74_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97765.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative metal-dependent hydrolase
SCNpilot_expt_1000_bf_scaffold_3757_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11092..11736
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ3_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87697.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_3757_15
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11825..12598)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B760E5 rbh
Membrane protein {ECO:0000313|EMBL:EZH73280.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical membrane protein
SCNpilot_expt_1000_bf_scaffold_3757_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13070..13633)
DNA (564bp) protein (188aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV3_9GAMM
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EIL92394.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
SCNpilot_expt_1000_bf_scaffold_3757_17
unknown

Not on your lists

13654..14064
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying 17 items

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