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SCNpilot_expt_1000_bf_scaffold_3761

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3761_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(277..1506)
DNA (1230bp) protein (410aa)
Major facilitator transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX4_9GAMM rbh
Major facilitator transporter {ECO:0000313|EMBL:EIL86815.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MFS transporter
SCNpilot_expt_1000_bf_scaffold_3761_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1543..2238)
DNA (696bp) protein (232aa)
Putative cytochrome c biogenesis protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX3_9GAMM rbh
Putative cytochrome c biogenesis protein {ECO:0000313|EMBL:EIL86814.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c biogenesis protein, transmembrane region
SCNpilot_expt_1000_bf_scaffold_3761_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2322..2591)
DNA (270bp) protein (90aa)
Thioredoxin/glutaredoxin n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX2_9GAMM
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:EIL86813.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thioredoxin/glutaredoxin
SCNpilot_expt_1000_bf_scaffold_3761_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2607..3029)
DNA (423bp) protein (141aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX1_9GAMM
MerR family transcriptional regulator {ECO:0000313|EMBL:EIL86812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
MerR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3761_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3228..3455)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL86811.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_1000_bf_scaffold_3761_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3501..5978)
DNA (2478bp) protein (826aa)
copA; copper-transporting ATPase CopA (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW9_9GAMM rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIL86810.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_1000_bf_scaffold_3761_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5975..6202)
DNA (228bp) protein (76aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW8_9GAMM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIL86809.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copper chaperone
SCNpilot_expt_1000_bf_scaffold_3761_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6407..7366)
DNA (960bp) protein (320aa)
Patatin n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW7_9GAMM rbh
Patatin {ECO:0000313|EMBL:EIL86808.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
patatin rbh
SCNpilot_expt_1000_bf_scaffold_3761_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7380..7505)
DNA (126bp) protein (42aa)
Transposase, TnpA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFQ3_9GAMM
transposase, TnpA family
Transposase, TnpA family {ECO:0000313|EMBL:AGG88887.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 9 items

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