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SCNpilot_expt_1000_bf_scaffold_5536

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5536_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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650..886
DNA (237bp) protein (79aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU31_9GAMM
SCNpilot_expt_1000_bf_scaffold_5536_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(971..1174)
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU32_9GAMM
twin arginine-targeting protein translocase, TatA/E family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_5536_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1189..1830)
DNA (642bp) protein (214aa)
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I1_9GAMM rbh
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL {ECO:0000313|EMBL:EIL94022.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipoprotein involved in nitrous oxide reduction rbh
SCNpilot_expt_1000_bf_scaffold_5536_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1843..2676)
DNA (834bp) protein (278aa)
Multi-copper enzyme maturation ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I2_9GAMM rbh
Multi-copper enzyme maturation ABC transporter permease {ECO:0000313|EMBL:EIL94023.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component rbh
SCNpilot_expt_1000_bf_scaffold_5536_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2673..3602)
DNA (930bp) protein (310aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I3_9GAMM rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIL94024.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component rbh
SCNpilot_expt_1000_bf_scaffold_5536_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3599..4864)
DNA (1266bp) protein (422aa)
Periplasmic copper-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I4_9GAMM rbh
Periplasmic copper-binding protein {ECO:0000313|EMBL:EIL94025.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitrous oxidase accessory protein rbh
SCNpilot_expt_1000_bf_scaffold_5536_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4918..6123)
DNA (1206bp) protein (402aa)
Nitrous-oxide reductase {ECO:0000313|EMBL:EIL94026.1}; EC=1.7.2.4 {ECO:0000313|EMBL:EIL94026.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Nitrous-oxide reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I5_9GAMM rbh
nitrous oxide reductase rbh
SCNpilot_expt_1000_bf_scaffold_5536_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6873..7082)
DNA (210bp) protein (70aa)
Regulatory protein NosR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I6_9GAMM
Regulatory protein NosR {ECO:0000313|EMBL:EIL94027.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
regulator of nitric oxide reductase transcription
Displaying 8 items

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