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SCNpilot_expt_1000_bf_scaffold_5969

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5969_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1289..2305)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZC87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69459.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
SCNpilot_expt_1000_bf_scaffold_5969_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2337..3236)
DNA (900bp) protein (300aa)
Methylmalonyl-CoA mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN1_9GAMM
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EIM00723.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylmalonyl-CoA mutase, N-terminal domain/subunit
SCNpilot_expt_1000_bf_scaffold_5969_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3528..5927)
DNA (2400bp) protein (800aa)
Methylmalonyl-CoA mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H6_9GAMM
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EIL94367.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methylmalonyl-CoA mutase, N-terminal domain/subunit
SCNpilot_expt_1000_bf_scaffold_5969_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6193..7029
DNA (837bp) protein (279aa)
TonB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMN0_9GAMM
TonB family protein {ECO:0000313|EMBL:EIM00722.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane transport energization protein TonB
SCNpilot_expt_1000_bf_scaffold_5969_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7121..8026)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4H7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94368.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysophospholipase rbh
SCNpilot_expt_1000_bf_scaffold_5969_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8037..8639)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDP9_9GAMM rbh
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EIL97590.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator rbh
SCNpilot_expt_1000_bf_scaffold_5969_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9251..9514
DNA (264bp) protein (88aa)
Peptidase family M48 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIZ0_9GAMM
Peptidase family M48
Peptidase family M48 {ECO:0000313|EMBL:AGG89643.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_5969_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9625..9960
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94371.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5969_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10174..11676
DNA (1503bp) protein (501aa)
Leucine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y1_9GAMM
Leucine dehydrogenase {ECO:0000313|EMBL:EIL94172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamate dehydrogenase/leucine dehydrogenase
SCNpilot_expt_1000_bf_scaffold_5969_10
unknown

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11932..12141
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5969_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12733..14289
DNA (1557bp) protein (519aa)
Phospholipase D/transphosphatidylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPN8_9GAMM rbh
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG89646.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_5969_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14353..15510
DNA (1158bp) protein (386aa)
acyl-CoA dehydrogenase (EC:1.3.8.4)
Isovaleryl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y3_9GAMM rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AIF47543.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Displaying 12 items

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