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SCNpilot_expt_1000_bf_scaffold_14822

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14822_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..445)
DNA (444bp) protein (148aa)
NmrA family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSI4_9GAMM
NmrA family protein {ECO:0000313|EMBL:EIL90175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14822_2
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(475..1230)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2Z6T2_9ACTO
putative aldo/keto reductase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_1000_bf_scaffold_14822_3
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1227..1454)
DNA (228bp) protein (76aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Streptomyces sp. e14 RepID=D6K029_9ACTO
oxidoreductase
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_1000_bf_scaffold_14822_4
unknown

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1625..1732
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14822_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1765..2880
DNA (1116bp) protein (372aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Serine hydroxymethyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA2_9GAMM
glycine/serine hydroxymethyltransferase
SCNpilot_expt_1000_bf_scaffold_14822_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2974..3483
DNA (510bp) protein (170aa)
Transcriptional repressor NrdR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA1_9GAMM rbh
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator NrdR rbh
SCNpilot_expt_1000_bf_scaffold_14822_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3634..4665
DNA (1032bp) protein (344aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:3.5.4.26 1.1.1.193) rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA0_9GAMM rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_1000_bf_scaffold_14822_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4693..5220)
DNA (528bp) protein (176aa)
Alcohol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB4_9GAMM
Zn-dependent oxidoreductase, NADPH:quinone reductase
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:AGG87939.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_14822_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5648..6574
DNA (927bp) protein (309aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB3_9GAMM rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGG87940.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_14822_10
unknown

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comp(6561..6668)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 10 items

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