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SCNpilot_expt_1000_bf_scaffold_4292

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4292_1
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..159
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGN7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74629.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4292_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282..677
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037DB48E
Biphenyl-2,3-diol 1,2-dioxygenase III {ECO:0000313|EMBL:CDM24418.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_1000_bf_scaffold_4292_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..1118)
DNA (417bp) protein (139aa)
Glyoxalase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0W3_9GAMM
Glyoxalase {ECO:0000313|EMBL:EIL93104.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K04750 PhnB protein
SCNpilot_expt_1000_bf_scaffold_4292_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1189..1812)
DNA (624bp) protein (208aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIM3_9GAMM rbh
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EIL87064.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_expt_1000_bf_scaffold_4292_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1888..2823)
DNA (936bp) protein (312aa)
Tyrosine recombinase XerD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJC0_9GAMM rbh
tyrosine recombinase XerD rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4292_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2856..3362
DNA (507bp) protein (169aa)
Putative membrane protein/domain protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBE1_9GAMM
putative membrane protein/domain protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4292_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3404..4153
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZE3_9GAMM rbh
methyltransferase family protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4292_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4238..5521
DNA (1284bp) protein (428aa)
Polyhydroxyalkanoate depolymerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSK7_9GAMM rbh
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:EIL90198.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
polyhydroxyalkanoate depolymerase, intracellular
SCNpilot_expt_1000_bf_scaffold_4292_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5531..5872)
DNA (342bp) protein (114aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQX9_9GAMM
putative methylated DNA-protein cysteine methyltransferase
Putative methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:AGG90185.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_4292_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5954..6358
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4292_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6366..6854)
DNA (489bp) protein (163aa)
Phosphate/sulfate permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY1_9GAMM
phosphate/sulfate permease
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4292_12
unknown

Not on your lists

6965..7399
DNA (435bp) protein (145aa)
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4292_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7516..8145)
DNA (630bp) protein (210aa)
Pit accessory protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM0_9GAMM rbh
phosphate transport regulator related to PhoU rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_1000_bf_scaffold_4292_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8280..9599
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQY3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94493.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
CBS domain-containing protein rbh
SCNpilot_expt_1000_bf_scaffold_4292_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9696..10460)
DNA (765bp) protein (255aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP1_9GAMM rbh
RNA methyltransferase, TrmH family, group 1 rbh
SCNpilot_expt_1000_bf_scaffold_4292_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10597..11163
DNA (567bp) protein (189aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP0_9GAMM
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIM02132.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
Displaying 16 items

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