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SCNpilot_expt_1000_bf_scaffold_2021

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2021_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132..1100)
DNA (969bp) protein (323aa)
Na+/Ca+ antiporter, CaCA family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWK8_9RHIZ rbh
Na+/Ca+ antiporter, CaCA family protein {ECO:0000313|EMBL:EKF42189.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
K+dependent Na+ exchanger related-protein; K07301 inner membrane protein rbh
SCNpilot_expt_1000_bf_scaffold_2021_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1171..2250)
DNA (1080bp) protein (360aa)
nitroreductase (EC:6.3.2.-)
Nitroreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NS86_9RHIZ rbh
Nitroreductase {ECO:0000313|EMBL:EKF42190.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_2021_3
unknown

Not on your lists

comp(2247..2408)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2021_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2413..3387)
DNA (975bp) protein (325aa)
ApbE family lipoprotein n=1 Tax=Nitratireductor indicus C115 RepID=K2PM90_9RHIZ rbh
ApbE family lipoprotein {ECO:0000313|EMBL:EKF42192.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
thiamine biosynthesis lipoprotein ApbE
SCNpilot_expt_1000_bf_scaffold_2021_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3392..4612)
DNA (1221bp) protein (407aa)
Na(+)-translocating NADH-quinone reductase subunit F (EC:1.6.5.-) rbh
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Nitratireductor indicus C115 RepID=K2N4A1_9RHIZ rbh
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000313|EMBL:EKF42193.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_2021_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4609..5211)
DNA (603bp) protein (201aa)
Na(+)-translocating NADH-quinone reductase subunit E {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00170325}; Short=Na(+)-NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; Short=Na(+)-translocating NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00179335};; NQR complex subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; NQR-1 subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Na(+)-translocating NADH-quinone reductase subunit E (EC:1.6.5.-) rbh
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Nitratireductor indicus C115 RepID=K2NWL0_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2021_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5208..5867)
DNA (660bp) protein (220aa)
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000256|SAAS:SAAS00170009}; EC=1.6.5.8 {ECO:0000256|SAAS:SAAS00179330};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Na(+)-translocating NADH-quinone reductase subunit D (EC:1.6.5.-) rbh
Na(+)-translocating NADH-quinone reductase subunit D n=1 Tax=Nitratireductor indicus C115 RepID=K2NS90_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2021_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5864..6682)
DNA (819bp) protein (273aa)
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00427};; NQR complex subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; NQR-1 subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
Na(+)-translocating NADH-quinone reductase subunit C (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit C n=1 Tax=Nitratireductor indicus C115 RepID=K2P4A9_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2021_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6675..7481)
DNA (807bp) protein (269aa)
Na(+)-translocating NADH-quinone reductase subunit B (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Nitratireductor indicus C115 RepID=K2PM94_9RHIZ rbh
Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000313|EMBL:EKF42197.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_2021_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7478..8779)
DNA (1302bp) protein (434aa)
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; Short=Na(+)-NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; Short=Na(+)-translocating NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00425};; NQR complex subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; NQR-1 subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="N
nqrA; Na(+)-translocating NADH-quinone reductase subunit A; K00346 Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:1.6.5.-] rbh
Na(+)-translocating NADH-quinone reductase subunit A n=1 Tax=Nitratireductor indicus C115 RepID=K2N4A5_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2021_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8797..9327)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWL5_9RHIZ rbh
Putative membrane protein {ECO:0000313|EMBL:CDN94582.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2021_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9404..10252)
DNA (849bp) protein (283aa)
Putative universal stress protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NS94_9RHIZ rbh
Putative universal stress protein {ECO:0000313|EMBL:EKF42200.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative universal stress protein UspA-like
SCNpilot_expt_1000_bf_scaffold_2021_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..10580)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN94580.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_2021_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10603..11190)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4B5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF42201.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2021_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11239..12357)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PM98_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF42202.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2021_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12476..13249)
DNA (774bp) protein (258aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
enoyl-ACP reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Nitratireductor indicus C115 RepID=K2N4A9_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_2021_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13253..13579)
DNA (327bp) protein (109aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ackA; acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Nitratireductor indicus C115 RepID=K2NWL9_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2021_18
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13786..14160
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JJN6_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA53469.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_1000_bf_scaffold_2021_19
unknown

Not on your lists

14167..14433
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2021_20
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14403..14624)
DNA (222bp) protein (74aa)
phosphate acetyltransferase (EC:2.3.1.8)
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA0_9RHIZ
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase {ECO:0000313|EMBL:EKF42205.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Displaying 20 items

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