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SCNpilot_expt_1000_bf_scaffold_2757

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2757_1
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1540)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D710_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK78432.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
prophage MuMc02, head decoration protein
SCNpilot_expt_1000_bf_scaffold_2757_2
unknown

Not on your lists

comp(1550..1834)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2757_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1834..2823)
DNA (990bp) protein (330aa)
Phage-related tail fibre protein-like protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X1A9_OCHA4
phage tail fiber-like protein
Phage-related tail fibre protein-like protein {ECO:0000313|EMBL:ABS15013.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_expt_1000_bf_scaffold_2757_4
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2833..3501)
DNA (669bp) protein (223aa)
Phage tail protein I n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT11_9RHOB
Phage tail protein I {ECO:0000313|EMBL:EEE47922.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
phage tail protein I
SCNpilot_expt_1000_bf_scaffold_2757_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3501..4496)
DNA (996bp) protein (332aa)
baseplate assembly protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002DFC031
Baseplate assembly protein J {ECO:0000313|EMBL:EZP46974.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
gpJ; Phage baseplate-assembly protein J
SCNpilot_expt_1000_bf_scaffold_2757_6
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4512..4904)
DNA (393bp) protein (131aa)
GPW / gp25 family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT09_9RHOB
GPW / gp25 family {ECO:0000313|EMBL:EEE46656.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
GPW/gp25 family protein; K06903
SCNpilot_expt_1000_bf_scaffold_2757_7
unknown

Not on your lists

comp(4897..5124)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2757_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5139..5657)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000361FD17
Phage baseplate assembly protein V {ECO:0000313|EMBL:EXL07420.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
phage baseplate assembly protein V
SCNpilot_expt_1000_bf_scaffold_2757_9
Aurantimonas phage AmM-1, Caudovirales, Viruses

Not on your lists

comp(5654..6466)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037AF469
Uncharacterized protein {ECO:0000313|EMBL:BAP94467.1}; TaxID=1503929 species="Viruses; unclassified phages.;" source="Aurantimonas phage AmM-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2757_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6468..6851)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWX4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81872.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2757_11
unknown

Not on your lists

comp(6853..7164)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2757_12
Rhizobium phage RR1-A, Caudovirales, Viruses

Not on your lists

comp(7177..8217)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TRN2_9CAUD rbh
Uncharacterized protein {ECO:0000313|EMBL:AGN34382.1}; TaxID=929833 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage RR1-A.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2757_13
Rhizobium phage RR1-A, Caudovirales, Viruses

Not on your lists

comp(8221..8595)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TP46_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGN34381.1}; TaxID=929833 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage RR1-A.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2757_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8608..9660)
DNA (1053bp) protein (351aa)
Peptidase S14, ClpP n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP19_RHITR rbh
peptidase S14, ClpP rbh
Peptidase S14, ClpP {ECO:0000313|EMBL:AGB71825.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_2757_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9671..9928)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LM85_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71826.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_2757_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9928..11442)
DNA (1515bp) protein (505aa)
Phage portal protein, lambda family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKQ6_RHITR rbh
phage portal protein, lambda family rbh
Phage portal protein, lambda family {ECO:0000313|EMBL:AGB71827.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 16 items

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